| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3179 |
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| Symbol | |
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| ID | 3918221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 3399971 |
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| End bp | 3401332 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640445963 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_498448 |
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| Protein GI | 87201191 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.579286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGACC TGTTCCTGCT GAGCTTCGTG CTGGCCTTCA TCGGCGCGGG CTTTCGCCGG
CCCTTCATCT TCGTGCTGGC CTACTCGTAC ATCGACATCG TGGCCCCGCA GAAGGTGAGC
TGGGGCATCC TCAGCCACAT TCCGGTGTCG CTCATCGCAT TCCTCTGCGC GTTCATCTCG
TGGTTCGTGG CGGAGGACAA GAACGGCATC CGCTTCTCCA TGCGCCAGTT CCTGCTGCTG
GCCCTGCTGG TCTATTGCGG GCTGACGACG CAGACCGCCG ACTTCCCGGC AGAGGCCGCG
GACAAGTGGG CCTGGGTGTG GAAGGCGCTG CTGTGGGCCC TGTTCCTGCC GCTGACGCTG
CGCACGCGCC TGCGCATCGA GGCGATCACC CTGATCCTTG CCCTGTCCAT CGGCGTGATC
GTGATCGGCG GCGGCATCAA GACCGCGGCC GGTGGCGGCG GATACGGCGA ACTGCGCCTG
CTGGTGAACG ACAACACCGG CCTCTACGAG GGCTCGATCA TCTCGGCAGT CGCCATTGCG
GTCATTCCGC TGGCGCTCTG GCTTTCGCGC TTCGGCACGA TCTTCCCGCC CGACTGGAGG
GTGAAGACCT TCGCCTGGGC GCTTTGCTTT GCCTGCGCGC TCATGCCCAT CGGCACCGGG
GCGCGGACCG GCCTTGTCTG CGTGGTGGTG CTGGCCGCGA TGATCCTGCG CACGGCAAAG
CGGCGCTTGC TGATCGTGTC GGTCATGGCC GCAGGCGCCC TGATCGCGGT CCCGCTCCTG
CCCAAGGAGT TCACCGACCG CATGGGCACG ATCCGGAACC ACCAGTCCGA CCAGTCCGCC
GGAACCCGCA TCGCGGTGTG GAAGTGGACG ATAGAGTTCG CCAAGACCCA TCCCTTCGGC
GGCGGCTTCG AGGCATATCG CCAGAACCGG CTGGAATACG ACACGGTCAA GGCCGACTAT
GCCGGCGACA ACAACGCCGC GCTCGAATAC CAGCCCATTG TCGAAGAGGG GCGCGCCTAT
CATTCCAGCT ACTTCGAGAT GCTGGGCGAA CAGGGCTATC CGGGCCTGGC CCTGTGGCTG
GCGCTTCACC TGCTGGGCGT GTGGCAGATG GAACTGCTGA GGCGGCGCTA TCGCAAGGAG
GCATCGAAGG AGTTCCGCTG GGTCGCCCCG CTGGCCGAAG CCTTGCAGCA GGCCCAGGTG
ATCTACCTCG TCGGCTCAAC CTTCGTCGGC ATCGCGTTCC AGCCGTTCTG CTACATGCTG
GTGGGCCTCC AATGCGGGCT CTGGGCCTAT ATCAAGCGGG TCCGCACAGC CACGCCTGAG
CCGTTCCGCA AGGCTTCAAC CCCGGTGACG GCACCCGCTT AA
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| Protein sequence | MLDLFLLSFV LAFIGAGFRR PFIFVLAYSY IDIVAPQKVS WGILSHIPVS LIAFLCAFIS
WFVAEDKNGI RFSMRQFLLL ALLVYCGLTT QTADFPAEAA DKWAWVWKAL LWALFLPLTL
RTRLRIEAIT LILALSIGVI VIGGGIKTAA GGGGYGELRL LVNDNTGLYE GSIISAVAIA
VIPLALWLSR FGTIFPPDWR VKTFAWALCF ACALMPIGTG ARTGLVCVVV LAAMILRTAK
RRLLIVSVMA AGALIAVPLL PKEFTDRMGT IRNHQSDQSA GTRIAVWKWT IEFAKTHPFG
GGFEAYRQNR LEYDTVKADY AGDNNAALEY QPIVEEGRAY HSSYFEMLGE QGYPGLALWL
ALHLLGVWQM ELLRRRYRKE ASKEFRWVAP LAEALQQAQV IYLVGSTFVG IAFQPFCYML
VGLQCGLWAY IKRVRTATPE PFRKASTPVT APA
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