| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_3066 |
|---|
| Symbol | |
|---|
| ID | 3916680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 3284809 |
|---|
| End bp | 3286107 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640445848 |
|---|
| Product | Sel1 repeat-containing protein |
|---|
| Protein accession | YP_498335 |
|---|
| Protein GI | 87201078 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCAG GACGGCGCGG CGCAGGACGG CGCGGCGCAG GACGGCGCGG CAGGGGGCAG
CGCGGCAGGG GGCAGCGCGG CAGGGGGCAG CGCGAGCGCT CCGTGCCAGC ACGGATCAGG
AAACGGACTT TGGTGGCAAT GGCTTCGATC GGGTTGAAAA CACGCGGCGG CGGGGCCTGC
AGGCGACTTG CGCGATACCG GGTGCTGACC CTCGCGCTGG CAGCGATGGC CGTCGCCGCA
ACGCCTGCCC GCGCCGATGT GAAGGCTGGC GTCGACGCGT GGTCGCGCGG CGATCACGCC
GGCGCGGTCA AGGAATGGCT CGGCCCGGCA GCCAGGGGCG ATGCCGATGC GCAGTTCAAC
ATGGGTCAGG CCTACAAGCT CGGGAAGGGC GTGACGCAGG ACCTGAAGCG CGCGGAAGCG
TGGTATCGCA AGGCGGCCGA ACAGGGGCAC ATCAAGGCGG GAGACACGCT CGGCCTCCTG
CTCTTCCAGG AAAACCGCAA GGCCGAAGCC CTGCCCTACC TGACGGCCTC GGCCTACCGG
GGGGAGCCGC GCGCGATGTA CATTCTGGGC ATCGCCCACT TCAACGGGGA CACTGTCGGC
AAGGACTGGG TGCGCGCCTA TGCGTTGATG AGCCGCTCGG CCGCGACCGG GCTCGACCAG
GCGACGCGCG GATTGGCCAC GATGGACGAG ATCATCCCGC TCGACCAACG CCAGTTGGCG
ATGTCGCTGG CCACGGAGCT GGAACAGAAG GCGCAGGCGA ACCGGGCAAG GGAATTTGCC
GCAGCCGATC TTGGCGTGAA AGCAGGTGCG CCCGCGCCAA TGCGCCCGCA GCAGGCACCT
GCTCCGCTCC AGCGCGCGGA ACTTCCGCCG TCAACGCCTT CGGTCGCCGC TCCCGTCACG
GCGGGCGCCG ACTTTGCCGA TCCGGTTCCG ATACCGACGC CCCGTCGCGT TGCCGCGAGC
CAGGCCAAGC CGGATGCCCC GCGCGAAGCC GCGCCACCCG CCGCAAGGGC AAAGCCCGCC
GCGCCCACGC AACCCAGGAA GGCCGCACCC TCCGCTTCAG CACCCAAGGC AGACGGCAAC
TGGCGCATCC AGTTCGGCGC ATTCGGAGTG AAGAGCAACG CCGACGCCCT GTGGGCGAAA
GTGAGGAATC GCGCCGAAGT CGCAGGGCAT GCCCGGATCG ATCTGCCCGC AGGCGGCGTA
TCGCGTCTTC TGGCGGGCGG CTACACCGAG AGCCAGGCCG ACAAGGCCTG CGCCGCGCTC
AAGGCTGGCG GCTTCAGTTG CCTGGTGGTA AAGCCCTGA
|
|---|
| Protein sequence | MAAGRRGAGR RGAGRRGRGQ RGRGQRGRGQ RERSVPARIR KRTLVAMASI GLKTRGGGAC
RRLARYRVLT LALAAMAVAA TPARADVKAG VDAWSRGDHA GAVKEWLGPA ARGDADAQFN
MGQAYKLGKG VTQDLKRAEA WYRKAAEQGH IKAGDTLGLL LFQENRKAEA LPYLTASAYR
GEPRAMYILG IAHFNGDTVG KDWVRAYALM SRSAATGLDQ ATRGLATMDE IIPLDQRQLA
MSLATELEQK AQANRAREFA AADLGVKAGA PAPMRPQQAP APLQRAELPP STPSVAAPVT
AGADFADPVP IPTPRRVAAS QAKPDAPREA APPAARAKPA APTQPRKAAP SASAPKADGN
WRIQFGAFGV KSNADALWAK VRNRAEVAGH ARIDLPAGGV SRLLAGGYTE SQADKACAAL
KAGGFSCLVV KP
|
|---|
| |