| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2763 |
|---|
| Symbol | |
|---|
| ID | 3916923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | + |
|---|
| Start bp | 2982157 |
|---|
| End bp | 2984184 |
|---|
| Gene Length | 2028 bp |
|---|
| Protein Length | 675 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640445542 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding |
|---|
| Protein accession | YP_498033 |
|---|
| Protein GI | 87200776 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG3576] Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase |
|---|
| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGATA CCCAACGCGT GGCCAACAGC CCGATCTGGC ATGAAGGCGA ACGCGCACTT
CAGGCTCATG TCGGCGTTGT CGATCGGATG GGCGAGGTGG GCGCTCGCGT GATCCGCCCC
TTCATGCCGG ACCAGCACCG CACCTTCTAC GCCCAGCTTC CTTTCGTGAT CCTCGGCAGC
GTCGATGCCG AGGGCGCGGC GTGGGCCACC GTGGTCGAGG GCGAACCCGG CTTCCTCTCA
TCGCCGGACC CCAAGAGCCT GGTGCTAGGT GCACTGCCAC ACGCGGATGA TCCGGCGCTG
GGCGGTATAC ACGATGAAGC GGCGCTCGGA CTGCTCGGCA TCGAACTGCA CAACCGCCGG
CGCAACCGTG TCAACGGCAC CTTGCGCTTC CCATCTGCCG GTGCACCGCT GCTGGAAGTT
GGCCAGAGCT TCGGCAACTG CCCCCAATAC ATCCAGCTTC GCGACGCCAC CTTGTCCCGC
GCGCCGGCTG CACCGCCGCC CCACCTGGCC GAGGAACTGC CCGCACTGGA CGCGGCGGCC
CGCGCCATGA TCGGCAGTGC CGACACCTTG TTTGTAGCCT CTTATGCCGA CAGGCTGGAT
AGCGGCAGGC AAGTCGACGT GTCCCATCGG GGCGGGAAGG CCGGCTTCGT GCGCGTCGAT
GCCGAGGGCA AGCTGACCAT TCCCGATTTC GCGGGCAACC TGTTCTTCGC CACGCTGGGC
AACGTACTGC TCAATGGGCA GGCAGGCCTC GTCTTCATCG ATTTCGAAAG CGGGGACCTG
CTGCAGATGT CGGGCAAGGC CGAGGTCGTT CTCGATTCAC CCGAAATCGC CAGCTTCGCC
GGGGCGGAGC GGCTATGGAC CTTCGTGCCG CAGCGGATCG TTCGCCGGAA GGGTGCGCTT
GCCCTGCGCT GGAGCTTCCG GGATAATGGC TGGTCTCCCA ATTCGCTGGC GACAGGCCAA
TGGCCCGCAG CTTTGCATTG GCAGCAATTG CGCGTCGAAC GCATTGTCGC GGAAAGCGCT
AGCATCCGCT CGTTCCATCT GCGTCCTGTG TCGCCGGATC TCGGCTGGCA GCACGAGGCC
GGGCAACACC TGCCAATTCG CGTAAGGCTG CCGGGCGAGG ATAGCCCTGC CGTGCGGACC
TACACGCTAT CGTCCGCGCC ATCAGATCCG CTTTACCGCA TCAGCGTGAA GCGAGAGGGC
AAGGTGTCGG CCTGGTTGCA CGAGCAGGTG CGCGAAGGCG ATATCATCGA AGCGCGCGCA
CCGGCGGGCA GCTTCGTCAT CGAGCCCGGA GCACCACGCC TCGCCGTGCT TATCGGTGCC
GGGATCGGCA TCACGCCGAT GATCTCCATG CTTCGCGAAC TGGTCAGCCT GGGTGCGAAT
GGAGCCCCGG CTCGACCAGC AGTGCTGATC CAGTCCGCGA GGTCACTGGC CGAGCGCGCT
TTTGCAAACG AACTTGCGAG TCTTGCCGAC CGCGTTCGCG TTGTCCGCGT GCTGGGAGAT
GCCAAGGGTG CGCAAGCGGG GGCCGACTAC GACTTGGAAG GCCGGATCGA CCTGCAACTG
CTGTCCGCTG TCCTGCCCTT CGGAGATCAC GACTTCTACC TGTGCGGGCC CAAAGGCTTC
ATGCAGGCAA TCTACGATGC GCTGCGTGGC GCAAACGTGC CTGACCATCG CATCCATGCC
GAAGCGTTCG GACCTTCGTC GCTTGTCCGC AGGCGCGATA CGACGCGCGA AACAGCGCCA
GCCGCACAAC CTTCTGCCGT CCCGGTCCCC GTGCTCTTCA CCGCCTCGCT CAAGGAAGCG
CGCTGGAAGC CCGGCGAAGG CACCCTGCTG GAACTTGCCG AAGCCCGCGG CCTCAAGCCC
GAATTCGGAT GCCGCAGCGG ATCGTGCGCA TCCTGCAAGG TGAAGCTTGT CTCGGGCGCG
GTCGCCTATC CGCGCACGCC ATCTGCCGAA GTCGCAAGCG GCGAAGTTCT GCTGTGTTGC
GCTGTCCCTG CCGAAGGGAA CGACAAGCCG CTTCAGGTCG AAGCGTGA
|
|---|
| Protein sequence | MDDTQRVANS PIWHEGERAL QAHVGVVDRM GEVGARVIRP FMPDQHRTFY AQLPFVILGS
VDAEGAAWAT VVEGEPGFLS SPDPKSLVLG ALPHADDPAL GGIHDEAALG LLGIELHNRR
RNRVNGTLRF PSAGAPLLEV GQSFGNCPQY IQLRDATLSR APAAPPPHLA EELPALDAAA
RAMIGSADTL FVASYADRLD SGRQVDVSHR GGKAGFVRVD AEGKLTIPDF AGNLFFATLG
NVLLNGQAGL VFIDFESGDL LQMSGKAEVV LDSPEIASFA GAERLWTFVP QRIVRRKGAL
ALRWSFRDNG WSPNSLATGQ WPAALHWQQL RVERIVAESA SIRSFHLRPV SPDLGWQHEA
GQHLPIRVRL PGEDSPAVRT YTLSSAPSDP LYRISVKREG KVSAWLHEQV REGDIIEARA
PAGSFVIEPG APRLAVLIGA GIGITPMISM LRELVSLGAN GAPARPAVLI QSARSLAERA
FANELASLAD RVRVVRVLGD AKGAQAGADY DLEGRIDLQL LSAVLPFGDH DFYLCGPKGF
MQAIYDALRG ANVPDHRIHA EAFGPSSLVR RRDTTRETAP AAQPSAVPVP VLFTASLKEA
RWKPGEGTLL ELAEARGLKP EFGCRSGSCA SCKVKLVSGA VAYPRTPSAE VASGEVLLCC
AVPAEGNDKP LQVEA
|
|---|
| |