| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_2499 |
|---|
| Symbol | |
|---|
| ID | 3916820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Novosphingobium aromaticivorans DSM 12444 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007794 |
|---|
| Strand | - |
|---|
| Start bp | 2698517 |
|---|
| End bp | 2700412 |
|---|
| Gene Length | 1896 bp |
|---|
| Protein Length | 631 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640445256 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_497769 |
|---|
| Protein GI | 87200512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.33724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCCCC TGGCTGCCAC GTGCGTGCCC GTCCTGATCC TGCTGATCGG CAGCGGTCTC
GACATGGGGC GGCTGTACAA GGCGCGGAAC CGGCTACAAT CCGCATGCGA CGCCGGTGCG
CTTGCCGGGC GGCGTTCGGT TTCAAGCGCC GGTTATGATG ATGCGGCCAA AGCCCAGGCT
GCGGCATTCT TCAACGCAAA CTTCAATGAA GACGATCTTG GGGCGACCGA AACAAATTTC
GCCACCAGTT CGGCTGATGG CGGCAGCCTG GTGGAAGGCA TCGCGACCAC GGATGTCGAG
ATGGTCCTGA TGAACCTGTT CGGCGTGATT TCGGTTCCGA TCAATGTGGA ATGCAGCGCC
ACCATGGATA TCGGCAATAC CGACGTCACG ATGGTCCTCG ATACGACAGG TTCGATGAGC
CAGACGCTGT CGGGCACGAC GACGAAGCGT ATCGACGCAC TCCGAACCGC GATGAAGAAC
TTCTATGATA CCGTCAGCGC CGCAACGACG GGGTCGAATG CCCGTGTCCG CTATTCCTTC
GTGCCCTACA GCTCGTCGGT GAACGTAGGT CAGCTCATTT ACGACCTCGA TCCGGACTAT
CTGGTCGACA CCTGGGCAAT CCAGTCACGA ACCCCCGTTT TCAACACGGT CACGGAGCAG
ATACTGACGG GATACGACAC CCCGGTCACG ACGACGGCCA GTTCGTACAG CAACGAGACC
ACGGGTAACG ATCAGTCTTA CAATTCGACG CGCTACAATT CGCTCTCGGC GTGCAACACG
GCAAAGCCGG CTGACGTTGC CTGGGCGAAC TACGGCAGCG CGACTCAATC GTCGACAACG
ACGACGAACA GCGCCGGTCA GCAGATCGTG ACGGTCACGG TAACACAGCC GCAGCGCAAG
ACCACTTATA CCTGTCAGAT GTCCGGCGGC AGATATCGTA TCTACTATTA CTATACGACG
AGGAATTACT ACACCTATAC GTACAATACG TCGAATCCTG TCTACACCAC GGTGACAAGT
CAGGTTTTCA GCAACTTTGC CTACAAGCAG ATCAACGTCG ACGTCTCCTC GTACAAGAAG
TTTCAGACAG TCACGGTCCA GAATGGCACC AACGGTGCCA ACGTCAGCTA TACCTGGAAG
GGGTGCATCG AAGAACGCGA TACCGAAGCC GCTTCCTCGT TCAGCTATTC GACTGTCGAC
GGAATGTCGC CATCCACGGC GCTGGACCTT GATATCGACA GGGTTCCCGA CAGTGATCCA
GCGACGAAGT GGGCGCCGAT GTGGCCCGAA CTTGGGTATT ACCGAACCGC ATCGTCAAGA
TCGTCGACGC CGGTTTCCAC CCTGGAGACG ACGAGCGGAT CGCAGTTGTC GGCGGCGTGC
CCATACAAGG CGCAGTTGCT GCAGACCATG TCGCAGTCCG CCTTCTATGC CTATGCCGAT
GCACTTTCGG CCAATGGCTC CACGTACCAC GACCTGGGGA TGTTGTGGGG CCTGCGCCTG
AGTTCGCCGG ATGGGCCGTG GCAGGCAATG GTCAACGAGA CGCCGGAAAA TGGCGGCGAA
GTTTCGCGGC ATATCATTTT CATGACCGAC GGCCAAATGG ACACCAACTA CAAGGTCATG
TCGACGTACG GCATCGAGTG GCACGACCGG CGAATAACCG ACGACGGGGT CACCGACCAG
GATGCGCGTC ACACCCTGCG GTTCCGGGCG CTTTGCGATG CGGCCAAGGC GAAGGGCTTC
CGGGTCTGGG TGATCGCCTT TGCGTCCGAT CTGAATGATG ACCTTTCATA TTGCGCATCG
GCCAGCAGCA CATTTCCGGC GACGAACGCG ACCGAACTGA ACACCGCATT CCAGGAGATC
GCCAAGAACG TTGCCGAACT GAGGGTCTAT CAGTGA
|
|---|
| Protein sequence | MLPLAATCVP VLILLIGSGL DMGRLYKARN RLQSACDAGA LAGRRSVSSA GYDDAAKAQA
AAFFNANFNE DDLGATETNF ATSSADGGSL VEGIATTDVE MVLMNLFGVI SVPINVECSA
TMDIGNTDVT MVLDTTGSMS QTLSGTTTKR IDALRTAMKN FYDTVSAATT GSNARVRYSF
VPYSSSVNVG QLIYDLDPDY LVDTWAIQSR TPVFNTVTEQ ILTGYDTPVT TTASSYSNET
TGNDQSYNST RYNSLSACNT AKPADVAWAN YGSATQSSTT TTNSAGQQIV TVTVTQPQRK
TTYTCQMSGG RYRIYYYYTT RNYYTYTYNT SNPVYTTVTS QVFSNFAYKQ INVDVSSYKK
FQTVTVQNGT NGANVSYTWK GCIEERDTEA ASSFSYSTVD GMSPSTALDL DIDRVPDSDP
ATKWAPMWPE LGYYRTASSR SSTPVSTLET TSGSQLSAAC PYKAQLLQTM SQSAFYAYAD
ALSANGSTYH DLGMLWGLRL SSPDGPWQAM VNETPENGGE VSRHIIFMTD GQMDTNYKVM
STYGIEWHDR RITDDGVTDQ DARHTLRFRA LCDAAKAKGF RVWVIAFASD LNDDLSYCAS
ASSTFPATNA TELNTAFQEI AKNVAELRVY Q
|
|---|
| |