Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1766 |
Symbol | |
ID | 3918325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 1862492 |
End bp | 1863166 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640444507 |
Product | ABC transporter related |
Protein accession | YP_497040 |
Protein GI | 87199783 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0656003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGATC CAGTGGTGCG CCTGCGCGAG CTGCGCCGTT CCTTCAGCCA GGGCGGGGTC ACCATCGACG TCCTGCGCGG CGTCAACCTC GAGATCCGCC CCGGCGAGAT CGTCGCGCTG CTCGGCCCTT CGGGATCGGG CAAGTCGACC ATGCTCCAGG CCATCGGCCT GCTCGAGGGT GGTTTTTCCG GCCTGATCGA GATCGCCGGG ACCGATGCGT CGAAGCTTTC GGGCGACGAC CGCACGGCCC TGCGCCGCGA TCACCTCGGC TTCGTCTACC AGTTCCATCA TCTCCTGCCC GATTTCAACG CGATCGAGAA CGTCGTCCTG CCCCAGCTCG TTGCCGGCAC GGACCGCGCC GTGGCCGAGG CGCGCGCAGC GGAACTCTTG AGCGCCCTCG GCCTCGCCAA GCGTCTCGAC CACCGGCCGA GCCAGCTTTC CGGCGGCGAG CAGCAGCGCG TTGCAGTGGC CCGTGCTCTT GCCAATCGCC CCGAAATGGT TCTCGCCGAC GAGCCCACCG GCAATCTCGA CGAGGCGACG GCCGACCGAG TGCTCGAGGA ATTCCTCAAG CTCGTGCGCG GGGAAGGGAG CGCTGCACTG ATCGCCACGC ACAACGAACG CCTTGCGTTG CGCATGGACC GCGTCGTGCG TCTTCACGAA GGCGTTCTCG AATAG
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Protein sequence | MSDPVVRLRE LRRSFSQGGV TIDVLRGVNL EIRPGEIVAL LGPSGSGKST MLQAIGLLEG GFSGLIEIAG TDASKLSGDD RTALRRDHLG FVYQFHHLLP DFNAIENVVL PQLVAGTDRA VAEARAAELL SALGLAKRLD HRPSQLSGGE QQRVAVARAL ANRPEMVLAD EPTGNLDEAT ADRVLEEFLK LVRGEGSAAL IATHNERLAL RMDRVVRLHE GVLE
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