Gene Saro_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1578 
Symbol 
ID3917253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand+ 
Start bp1633923 
End bp1634546 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID640444318 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_496852 
Protein GI87199595 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.661779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATA GCGGTGCAGC CGAACCGATC GTTTACGTGG TCGACGACGA CGAAAGCGCG 
CGACATTCGC TGGAGTTCCT GCTCGACGTG GCGGGCATCC GTGTGCGCTC GTTTCCGAAC 
GCTGACGCCT TCCTCAAATC CTCTCCGCCG CTCGCCGGGG CCTGCATCGT TACCGACGTG 
CGGATGCCCG GAACAGGCGG CATCGAACTG GTCGAGGAGT TGCATCGGCG CGGCGCGACG 
GCGCCAGTGA TCGTCATTAC CGGCCACGCG GACGTACCGC TGGCGATCCA GGCAATGAAG 
GCGGGTGTCG CAGACTTCAT CGAGAAGCCG TTCGACGACC AGGTGATGCT GGAAGCGATC 
CGGAGCGCAT TGGCTCGCAA CGCCGGCGAC CAGCAGGCCC AGGCGGAGCG TCAGGCAGTG 
CTGGACCGCA TGGCCACGCT CTCCCCGCGC GAGCGCGAGG TCGTCGTCGG GCTTGTCGCC 
GGCAAGGCGA ACAAGGTCAT CGCCTTCGAT CTCGATATCA GCGCCCGGAC GGTGGAAGTC 
TACCGCGCCA ATGCCATGAT GAAGATGCAG GCGCGGACGC TTTCCGATCT GGTGCGCATG 
GTGACGCTCG CCACGCTGAC CTGA
 
Protein sequence
MANSGAAEPI VYVVDDDESA RHSLEFLLDV AGIRVRSFPN ADAFLKSSPP LAGACIVTDV 
RMPGTGGIEL VEELHRRGAT APVIVITGHA DVPLAIQAMK AGVADFIEKP FDDQVMLEAI 
RSALARNAGD QQAQAERQAV LDRMATLSPR EREVVVGLVA GKANKVIAFD LDISARTVEV 
YRANAMMKMQ ARTLSDLVRM VTLATLT