| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0606 |
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| Symbol | |
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| ID | 3915618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 651140 |
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| End bp | 654733 |
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| Gene Length | 3594 bp |
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| Protein Length | 1197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640443336 |
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| Product | allophanate hydrolase subunit 2 |
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| Protein accession | YP_495887 |
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| Protein GI | 87198630 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0511] Biotin carboxyl carrier protein
[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0957568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTTCG ACACCGTCCT CATCGCCAAT CGCGGCGCCA TCGCCACGCG GATCATCCGT
ACCCTGCGGC GCATGGGACT GCGTTCGGTC GCGGTCTATT CCGAGGCCGA CAAGGATTCG
CTGCACGTCG TGCTTGCCGA CGAGGCAATC TGCATAGGCG CGGCGCGGGC GGCGGAAAGC
TACCTCAACA TCCCTGCAAT TCTCGATGCC GCCCGCCGCA CCGGCGCCGG GGCAATCCAC
CCCGGCTACG GCTTCCTTGC CGAGAACGTG GAGTTCGCCG AAGCCTGCGA GAAGGAAGGC
ATCGTCTTTA TCGGTCCCAC GCCCAACAAC ATCAGGACCT TCGGCCTGAA GCACAGCGCC
CGCGCGCTTG CCGCGGCCCA CGGTGTCCCG CTGGCTCCCG GCACCGATCT GCTGACCGAC
GAGACCGAGG CGGTCCAGGC CGCGAACGGC ATCGGATACC CGGTAATGCT CAAGGCCACC
GCTGGAGGCG GCGGCATCGG CATGCGCGTC TGCGAGGACG AAGCGGACGT CCGCGAAGGC
TTTTCCGCGG TGGCGCGGCA GGGCCTCGGC AATTTCGGCG ATGCCGGCGT CTTTCTCGAG
CGCTACATTC GCCAGGCGCG GCACATCGAG GTTCAAATCT TCGGCGACGG TCGCGGCCGT
ATCGTGGCGC TCGGCGAACG GGACTGCTCG CTCCAGCGGC GCAACCAGAA GGTCGTGGAG
GAAGCGCCCG CTCCCCTCCT TCCACCGGCG GTGCGCAGCG AACTGATCGC CGCCGCCATC
CGCCTCGGTC AGGCGGCCGG CTATCGCTCG GCCGGAACGG TCGAATTTCT CTATGATGCC
GAGCGCGAGG AATTCTTCTT CCTCGAAATG AACACCCGCC TCCAGGTCGA ACACGGCGTT
ACCGAAGAGG TCATGGGCGT CGATCTGGTC GAATGGATGG TCCGGGGCGG CGGCGGCGAT
TTCGGGTTCC TCGACGACGA CCCGCCGCGT CCATCCGGGC ACTCGATCCA GGTCCGGCTC
TATGCCGAAG ATCCCGCACT CGACTATCGT CCGACCTCGG GCACCCTTAC CGCAGTGACT
TTCCCGGAAG GCGTCCGGAC AGAGACATGG TGCATGGCCG GAACCACGGT CAGCACGTGG
TACGACCCGA TGCTGGCCAA GCTGATCGTC CACGCCGAAT CACGCGAGGC AGCAGTGGCG
GCGATGCAGG ACGCGCTCGA CCGCAGTCGC ATTGACGGGT TCGAAACCAA CCTGCGCTGG
CTGCGTGATG TCGTGCGCTC GCCCGCCTTC ACCAGCGGCG AGGTCTCCAC CCGCGCCCTG
TCTCACGTCG CTCACGTGCC ACGCAGCATA ACCGTCGTCA GCGGCGGCAC CGCGACGATG
GCGCAGGACT GGCCCGGACG GCAGCGGCTC TGGGCAGTGG GCGTCCCGCC ATCCGGACCG
ATGGACGACC TGTCGTTCCG GCTCGGCAAC CGCCTGCTCG GCAATCCCGA GGGTACTGCC
GGTCTCGAAG TGGCGATCAC CGGCCCGACC CTCACGTTCA ATACAGCCGC CCGCGTGTGC
GTGACCGGCG CGGATTTCGG GGCGCGGCTC GACGGGCAGC CTGTCCCGCG CGGCATGGCC
ATCGACATTG CCGCTGGCCA GACGCTCGCG CTCGGTCGCG CCTCGGGCGG AGGGATGCGC
GGCTACATCC TGTTTGCCGG CGGCCTCGAC ATCGCGCCGT ACCTCGGCAG CCGCAGCACG
TTCGAACTCG GCCAGTTCGG CGGTCACGCC GCGCGCCGCC TGCTGGCGGG CGACACGCTC
CATCTCGGCG ACGAACCGGC GCAGCCCGCC CTTCCCGCCG CAAACCTGCC CGAACTGTCG
AACGAATGGG CGCTGCGCGT CATGTACGGG CCGCACGGCG CACCCGACTT CTTCACCCGC
GAAGACATCG ACACGCTGGT CGCCGCTGAA TGGCAGGTGC ACTACAACAG CAACCGCACT
GGCATCCGGC TTGTCGGCCC CAAGCCGCAG TGGGCGCGCG AGGACGGCGG CGAGGCGGGC
CTGCACCCCT CGAACATCCA CGACAATCCC TATGCGATCG GCGCGGTCGA CTTCACCGGC
GACATGCCGA TCATCCTCGG ACCGGACGGT CCCTCGCTCG GCGGCTTCGT CTGCCCCTTC
GTGGTGATCG CGGCGGACCG CTGGAAGATC GGCCAGCTCA CGCCGGGCGA CAAGCTCCGC
TTCGTTCCGG TAAATTGCGC GGATGCCGCC GCGGCGAACG ACCAGCAACG GCGCTTCCTC
GAAACCGGCA AGCCCGCGCA GGGCTGTCCG GGGAGGCCGA TGGAGACGCT CTCGCCCATC
CTCGCCGTCA TCGATGAAAG CCCGCGCAGC CCCCGGACCG TCTATCGCCA GCAGGGCGAC
CGCAACATCC TGGTAGAATA CGGGCCGATC GTACTCGACA TCGAATTGCG CATCCGCGTG
CAGGCGCTGA TGACCGAGCT GGAACGGCTC GCCCTGCCCG GCGTGATCGA CATCGTCCCG
GGCATCCGCT CGCTCCAGTT CCATTTCGAC GGCGATGCGA TGACCCAGGA GGCCGCGCTC
TCGGTCCTGA TCGCGGCAGA GGAGCGGCTG GGCGACCTCG AGGACTTCAC CATCCCCTCG
CGCATCGTCC ATCTGCCGCT GAGCTGGCGC GATCCGGCCA CGATCGAAAC GATCGAGAAG
TACATGGGCG CCGTGCGCGA CGACGCGCCA TGGTGTCCCG ACAACATCGA GTTCATACGC
CGGATCAACG GCCTGCCCGA CGTGGCGGCG GTGGAGAACC TGATCTTCGA GGCGAACTAC
CTCGTCCTCG GCCTGGGCGA CGTCTATCTC GGTGCACCGG TGGCGACGCC CGTCGATCCC
CGCCATCGGC TGGTCACGAC CAAGTACAAC CCGGCGCGCA CCTGGACGCC GCCGAACGTG
GTCGGCATCG GCGGTGCCTA CATGTGCATC TACGGGATGG AAGGCCCCGG CGGCTACCAG
CTCTTCGGCC GCACCATCCA GGTGTGGAAC ACCCACCGCC AGACCGATGC CTTCATCGAT
GGCAAGCCGT GGCTGCTGCG CTTCTTCGAC CAGATCCGCT TCTACCCGGT CAGCGCCGAA
GAGCTTGAAG AATGGCGGCG GGACTTTCCC GCGGGCCGGC GCTCGATCCG GATCGAGCCT
TCCGAGTTCC GCCTTGCCGA CTACCGTCGC TACCTGGCCG ACAATGCCGA AGGGATCGCC
GAGTTCGAGG CAAGGCGTCA GGCCGCTTTC GACGAGGAAC GCGCCGAATG GCAAAGGCGC
GGAGAATTCG ACCGCACCGA CCTGGTCGAA CCCGAAGCGG CCGAAGCGGG CACCGTCGAA
GTGCCCGATG GCGCGGACCT CGTCGAAGCA CCCTTCGGCG GGAGCGTCTG GAAAATGCTC
GTGTCGGTGG GCGACGAGGT CGAGGCCGGC GAGACCATCG CGATCATCGA GGCGATGAAG
ATGGAATGCC GGGTCGAAAG TCCGGGGGCG GGCACTGTCG CCGCGCTCTA TGCGCAGGAG
CGCCAGTCGG TCCAGCCCGG CACGCCGATG CTCGCCCTGA CGAGGCACGC ATGA
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| Protein sequence | MNFDTVLIAN RGAIATRIIR TLRRMGLRSV AVYSEADKDS LHVVLADEAI CIGAARAAES
YLNIPAILDA ARRTGAGAIH PGYGFLAENV EFAEACEKEG IVFIGPTPNN IRTFGLKHSA
RALAAAHGVP LAPGTDLLTD ETEAVQAANG IGYPVMLKAT AGGGGIGMRV CEDEADVREG
FSAVARQGLG NFGDAGVFLE RYIRQARHIE VQIFGDGRGR IVALGERDCS LQRRNQKVVE
EAPAPLLPPA VRSELIAAAI RLGQAAGYRS AGTVEFLYDA EREEFFFLEM NTRLQVEHGV
TEEVMGVDLV EWMVRGGGGD FGFLDDDPPR PSGHSIQVRL YAEDPALDYR PTSGTLTAVT
FPEGVRTETW CMAGTTVSTW YDPMLAKLIV HAESREAAVA AMQDALDRSR IDGFETNLRW
LRDVVRSPAF TSGEVSTRAL SHVAHVPRSI TVVSGGTATM AQDWPGRQRL WAVGVPPSGP
MDDLSFRLGN RLLGNPEGTA GLEVAITGPT LTFNTAARVC VTGADFGARL DGQPVPRGMA
IDIAAGQTLA LGRASGGGMR GYILFAGGLD IAPYLGSRST FELGQFGGHA ARRLLAGDTL
HLGDEPAQPA LPAANLPELS NEWALRVMYG PHGAPDFFTR EDIDTLVAAE WQVHYNSNRT
GIRLVGPKPQ WAREDGGEAG LHPSNIHDNP YAIGAVDFTG DMPIILGPDG PSLGGFVCPF
VVIAADRWKI GQLTPGDKLR FVPVNCADAA AANDQQRRFL ETGKPAQGCP GRPMETLSPI
LAVIDESPRS PRTVYRQQGD RNILVEYGPI VLDIELRIRV QALMTELERL ALPGVIDIVP
GIRSLQFHFD GDAMTQEAAL SVLIAAEERL GDLEDFTIPS RIVHLPLSWR DPATIETIEK
YMGAVRDDAP WCPDNIEFIR RINGLPDVAA VENLIFEANY LVLGLGDVYL GAPVATPVDP
RHRLVTTKYN PARTWTPPNV VGIGGAYMCI YGMEGPGGYQ LFGRTIQVWN THRQTDAFID
GKPWLLRFFD QIRFYPVSAE ELEEWRRDFP AGRRSIRIEP SEFRLADYRR YLADNAEGIA
EFEARRQAAF DEERAEWQRR GEFDRTDLVE PEAAEAGTVE VPDGADLVEA PFGGSVWKML
VSVGDEVEAG ETIAIIEAMK MECRVESPGA GTVAALYAQE RQSVQPGTPM LALTRHA
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