| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0246 |
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| Symbol | |
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| ID | 3917597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 254975 |
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| End bp | 256591 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640442973 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_495528 |
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| Protein GI | 87198271 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCCAA AGGCGAACGG CGGCGTGGCA TGGCTGGCTC TGCTTCTGGC GGAAACAGCC
ACAGGCACCG TCGTATCCAC AGTCGCACCC ACCGTCGCCC GGGCGCAGGA GATCGCGAGC
ACTTTCGTCG AGGCGCCGGA ACTGCCACCC GAAACCCCGT CCGACATCGC CGACCAGTTG
CGGGAACCGA CCCCCGTGGC GGCCCTGCCG GACGCGCTGC GCCGTGCCTA CTGGTCCAAT
CCCAGCCTTC AGGCCCAGCG CGCATCGGTA CGCGGGGCGG ACTGGCGCAT TCCCCAGGCC
CGCGCCGCCT ATGGACCCAA GCTCAGCGCA TCGGGCACCT ATGGCTGGCA GCGCGACAAC
TTCGAGACCC CGGCGGGCGT CTATACCGCG TTCAATGGCT GGACGAGCAC GGCACAGGCG
ATCCTCACGC AGCCCCTGTT CACCTTCGGG CGAAATGTCG CGGCCGAACA GTTCGCGTCC
GCGCAAGTGG AATACCAGCG CAACGTCCTG CGCTCGACCG AGCAGCAGAC CATGCTCGAT
GCGATTGGCG CCTATGTCGG CGTGCTGCGC GACCGCGCCG CCGTGGGCAT CGCGCGCGAC
AACCTTGCGC TGCTCGAACA GGAGCTTTCC GACAACCAGG CCCGCTTCAA CGCGCGCGAG
GTGACGTCGA CCGACGTGCA GCAGGTGGAA ACCCGCGTCG ATCTGGGCCG GGCACAATTG
CTCGCCGCGC AGCGTGCCGC CGCCGGAAGT GAGGCCACGT TCCTTCGTAC CACCGGTGCG
CCGGCCGCCG AGAATGCCGC CGCGCCCAAT CCGTTGAGCC TGCCCGTGCG GACGATCGAG
GAGGCCTATC TCTTTGCCGA ACTGCACAAT CCCGTGCTGT TCGCGGCCCA GGCGCGCGAG
AAGGTTTCGC GGGCCCAGGC GGCCAGCGCG CGGGCGGACC TGATGCCGCG CGTCGACCTG
CGCGGATCAG CCGATTACGG CACGCTTTCG CCCTATTCGA ATGCGCTTCG CCAGAACACC
CTGCGCGGCG AGGTGGTGCT GAGCGCACCG CTGTTCGAAA GCGGCGTGCG CCGCGCGCGT
CTTGCCGAGG CGGATGCGGC GAACGATGCG GACTGGCGGC TCGTCGATGC GGCCATGCGC
GAAAACCGCG CCGCGATCGC CGATGCCTGG AGCGAATGGC AGGCGCAGAC CGGGGGCATC
GCCCGGCTTG GCGAAGCGGT CGAATCCGCG CGCAAGGCCT ATGACGGCGC GCTGCTCCAG
GAACGTGCCG GTCTGCGGAC CACGCTGGAC GTGCTCGATC TTGCACGGGA ACTGCTTTCG
GCCCGCAACG GCTACAACAA TGCCATTGCC GGGGCGACAA TCGCCAAGGC GCGCCTGCTC
TTCGCGATGG GCTCGCTCGA CTATGCGTGG CTGATGCCCG ACGAGGCGCG ATACGATGCG
GACGGGCACC TGCAGGACGT GCGTCACAAG GGTGACGTGC CGCTGCTCAC CCCGCTGTTC
CGCGCGCTCG ACAGCGTCGT CGCCGGCGGC GGCAAGCCGC GCCCGCTGCG CGATCCTTCC
GCCAAGGCGA CCACGTCGGG CTTCACCCTG ACCGAGCAGC CCGCGCCGGG CCAGTAG
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| Protein sequence | MRPKANGGVA WLALLLAETA TGTVVSTVAP TVARAQEIAS TFVEAPELPP ETPSDIADQL
REPTPVAALP DALRRAYWSN PSLQAQRASV RGADWRIPQA RAAYGPKLSA SGTYGWQRDN
FETPAGVYTA FNGWTSTAQA ILTQPLFTFG RNVAAEQFAS AQVEYQRNVL RSTEQQTMLD
AIGAYVGVLR DRAAVGIARD NLALLEQELS DNQARFNARE VTSTDVQQVE TRVDLGRAQL
LAAQRAAAGS EATFLRTTGA PAAENAAAPN PLSLPVRTIE EAYLFAELHN PVLFAAQARE
KVSRAQAASA RADLMPRVDL RGSADYGTLS PYSNALRQNT LRGEVVLSAP LFESGVRRAR
LAEADAANDA DWRLVDAAMR ENRAAIADAW SEWQAQTGGI ARLGEAVESA RKAYDGALLQ
ERAGLRTTLD VLDLARELLS ARNGYNNAIA GATIAKARLL FAMGSLDYAW LMPDEARYDA
DGHLQDVRHK GDVPLLTPLF RALDSVVAGG GKPRPLRDPS AKATTSGFTL TEQPAPGQ
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