| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5009 |
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| Symbol | |
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| ID | 5705464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 5678262 |
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| End bp | 5679104 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641274402 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001539743 |
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| Protein GI | 159040490 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.594309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000307412 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGACAAGC GGTTGTTGTT GTGGATAACT CCGACCAGAG TCGGGCTGAC CTGCCGTGCG
CCGCATGGAC CGGCCGGGCG GAGACGCATC CTCGGGCTCG GTCCGCGCTA CGCTCCCGCC
GTGCTGCTGC CCCTCGTGGC CGCCGTGGTT GGCGCCGGTT GGGGGATGCT GGTGCCCGGG
CTGGTCGACC GGTATGCCGT TCACTGGCCG GACGGTCGGC CCAGACCGGC CTGGCGGACC
ACCTGCCCCG ACTGCACCAC CGCGAGGCCA CCCTGGTGGC GGGCATCCGG GCGGTGCCCG
GCCTGCCGTG GCCCGCTCAC TCCGGGACGG GCGGTCACCG TGCCCCTCGC CGCCGCCACC
ACCGCCGTCA CGGTAGCCGG CGTCGGATCC ACCTGGGCCC TGCCGGCGTT CCTGCTGCTC
GCTGCCCTCG CGGTGCCGCT GGCCTTGGTC GACCTGCGGG TGCTGCGGCT GCCCGACCCG
TTGGTGGGCA TCGCCGTCGG CGGTGGGACG GCCCTGCTGG CGATCGCCGC GGTGGCCGAC
CAGGCCGCCC CGGCGCTGGG CCGTGGCCTG CTCGCCGCTG CGCTCTGCGG CGTCGGCTAC
CTGACGCTCG CACTGCTGCC CCGGTCCCAG CTCGGTTTCG GCGACGTGAA GCTCGGCGCG
GCTCTCGGGC TCTACCTCGG CTGGCTGGGG TGGCAGACCG TGGCGGTCGG GGTCCTGCTC
GCTCCGCTGG TGAACCTTCC GGTGGTCATC GGCTTTCTGG TGGCCGGTCA TGCTGGCCGG
CGGACCCCCG TACCGTACGG TCCGGCGATG CTCGTGGCGG CGATCGCCGC CACGGTGCTC
TAG
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| Protein sequence | MDKRLLLWIT PTRVGLTCRA PHGPAGRRRI LGLGPRYAPA VLLPLVAAVV GAGWGMLVPG
LVDRYAVHWP DGRPRPAWRT TCPDCTTARP PWWRASGRCP ACRGPLTPGR AVTVPLAAAT
TAVTVAGVGS TWALPAFLLL AALAVPLALV DLRVLRLPDP LVGIAVGGGT ALLAIAAVAD
QAAPALGRGL LAAALCGVGY LTLALLPRSQ LGFGDVKLGA ALGLYLGWLG WQTVAVGVLL
APLVNLPVVI GFLVAGHAGR RTPVPYGPAM LVAAIAATVL
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