Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4851 |
Symbol | |
ID | 5707630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5506217 |
End bp | 5506978 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641274247 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001539592 |
Protein GI | 159040339 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00849976 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTACGCCG AGGAGCGACA GCAGGAGATC GTCCGGTTGG CCCGGTCCAA TGGCCGCGTC GACGTGGCGA CGCTTGCCGG CACTCTCCAG GTGACGACGG AGACGATCCG GCGTGACCTC ACCGTGCTGG AGCGAGCCGG CGTACTGCGC CGGGTGCACG GCGGAGCGAT CCCCGCGGAA CGGCTGGGAT TCGAGCCGGC CCTGGCCACC CGGGACTCGG TCCTGATCCA CGAGAAGGAG CGGATCGCCG CGATGGCGCT GGCCGAGGTG CCGTCGGAGG GCTCGATCAT CCTCGACGCG GGCAGCACGA CCGCCCGCCT CGCCGAGGCG CTGCCCACCG ATCGAGAGCT GACGGTTGTG GTCAACTCCC CGGTCATCGC CACCCTTCTC GGCTCCCGGC CGAATCTGAA CGTGCTCCTC CTGGGCGGAC GACTGCGTGC CCGCACCCTG GCCACGGTGG AGGACTGGGC CCTGCGCGCG ATCGCCGACC TGTACGTTGA CGTCGCGTTT CTCGGCACCA ACGGATGCTC GGTCAGGCGG GGCCTGACCA CGCCCGACCC GGCCGAGGCG TCGGTGAAGC GGGCGATGAT CGCGGCAGCG CGCCGCGCCG TGCTCCTCGC TGACCACACG AAGTTCGGCA ACGACCACTT CGCGCGGTTC GGGTCTCTCA CCGACCTGGA CCTGATCGTC ACCGACTCCG ACGTCGAGGA CCGTCTCGCG GTCGAGATGG AGAGCGCCGG TGTGCGGGTG GTGCAGGCAT GA
|
Protein sequence | MYAEERQQEI VRLARSNGRV DVATLAGTLQ VTTETIRRDL TVLERAGVLR RVHGGAIPAE RLGFEPALAT RDSVLIHEKE RIAAMALAEV PSEGSIILDA GSTTARLAEA LPTDRELTVV VNSPVIATLL GSRPNLNVLL LGGRLRARTL ATVEDWALRA IADLYVDVAF LGTNGCSVRR GLTTPDPAEA SVKRAMIAAA RRAVLLADHT KFGNDHFARF GSLTDLDLIV TDSDVEDRLA VEMESAGVRV VQA
|
| |