Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4711 |
Symbol | |
ID | 5707220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5334443 |
End bp | 5335951 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641274109 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001539455 |
Protein GI | 159040202 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.243441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000510854 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACCGAGC AGAACGCCGT ACCAGTCGAC CCCGCTGATG ACCTTCCGGA GCAGATGAAG GTCCGCCGGG AGAAGCGGGA CCGGATGCTC GCCGAGGGGG GCGAGCCGTA TCCGCTCGGC TACCCGCGGA CCAGCACGTT GGCTGAGATC CGGCAGGGGT ACGCCGACCT GCCCACCGAC ACGGCCACCG GCGACCGCGT GTCGGTCACC GGTCGGGTGA TCTTCATCCG GAACACGGGC AAGCTCTGCT TCGCCACGCT GCGGGACGGC GACGGGACCG AGTTGCAGGC GATGCTCTCC CTGGACCGGG TCGGCGCACA GCGGCTCGAG GACTGGAAGC GGCTGGTGGA CCTCGGCGAC CTCGTCGGGG TGACCGGTGA GGTGATCACC AGCCGACGCG GTGAGTTGTC GGTGCTGGCG GAGGAGTGGG CGGTCACCGC GAAGGCCCTT CGCCCGCTGC CGGTGGCGCA CAAGCCGCTC AGTGAGGAGG CCCGGGTCCG GCAGCGCTAC GTCGACCTCA TCGTGCGCCC ACAGGCCCGC CAAATGGTGC GTACCCGGGC GACGGCGGTC CGCAGCCTGC GGGAATCGCT GCACGAGCGG GGTTTCCTCG AGGTGGAGAC CCCGATGCTC CAGCTGCTGC ACGGCGGCGC CACCGCCCGT CCATTCGTAA CCCACAGCAA TGCGCTCAGC AGCGATCTGT ATCTGCGAAT CGCTCCAGAG CTATTCCTCA AGCGCGCGCT CGTTGGTGGC ATCGATCACA TCTTCGAGAT CAACCGCAAC TTCCGCAATG AGGGTGTCGA CTCGTCACAC TCACCGGAGT TCGCGATGCT CGAGGCGTAC CAGGCGTACG GCGACTACGA CACGATCGGT GATTTGACCC GTCATCTCGT CCAACAGGCG GCGCTCGCGG TCGGCGGTTC GACCGTGGTG ACACACGCGG ACGGTCGTGA GTTCGACCTC GGCGGCGAGT GGGCTTCGGT GACGTTGTTC GGCGCCCTTT CCGAGGCACT CGGAGAGGAG ACCACGGTGC GCACGGAGCG GAGTCGCCTG GTCGAGTACG CCGACAAGGT GGGCTTGGCG GTCGACCCGA AGTGGGGTCC GGGCAAGCTG GCCGAGGAAC TGTTCGAGGA GTTGGTCGTC CCGGGCCTCC TGGCGCCTAC CTTCGTCCGG GACTACCCCG AGGAGACCAG CCCACTGGTT CGGGCGCACC GTGCCGAGCC GGGTCTGACC GAAAAGTGGG ATCTTTACGT GCTCGGCTTC GAACTGGGCA CGGGCTACTC CGAGTTGGTG GATCCGGTGA TCCAGCGTGA GCGTCTGGTT GCTCAGGCGC AGCTTGCGGC GCGGGGCAAC GACGAGGCGA TGCGGCTCGA CGAGGACTTT CTCCGCGCGA TGGAGTACGG AATGCCACCG TCTGGTGGCA TGGGAATGGG AATCGACCGG CTCCTGATGG CGCTGACCGG CCTGGGAATT CGGGAAACCA TCCTCTTCCC GCTGGTTCGA CCTGAGTGA
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Protein sequence | MTEQNAVPVD PADDLPEQMK VRREKRDRML AEGGEPYPLG YPRTSTLAEI RQGYADLPTD TATGDRVSVT GRVIFIRNTG KLCFATLRDG DGTELQAMLS LDRVGAQRLE DWKRLVDLGD LVGVTGEVIT SRRGELSVLA EEWAVTAKAL RPLPVAHKPL SEEARVRQRY VDLIVRPQAR QMVRTRATAV RSLRESLHER GFLEVETPML QLLHGGATAR PFVTHSNALS SDLYLRIAPE LFLKRALVGG IDHIFEINRN FRNEGVDSSH SPEFAMLEAY QAYGDYDTIG DLTRHLVQQA ALAVGGSTVV THADGREFDL GGEWASVTLF GALSEALGEE TTVRTERSRL VEYADKVGLA VDPKWGPGKL AEELFEELVV PGLLAPTFVR DYPEETSPLV RAHRAEPGLT EKWDLYVLGF ELGTGYSELV DPVIQRERLV AQAQLAARGN DEAMRLDEDF LRAMEYGMPP SGGMGMGIDR LLMALTGLGI RETILFPLVR PE
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