Gene Sare_3361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3361 
Symbol 
ID5707985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3881191 
End bp3882039 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content73% 
IMG OID641272787 
Productbeta-lactamase 
Protein accessionYP_001538154 
Protein GI159038901 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00282427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATCTTCG ACGGCCTCGA CGCGGACCTC GACCGGGCGT CCGGCACCGT CTCGGCGTCC 
CTGGGTCGAC TCGGTGCCAC CCCCACCTGG ACCCGGCACC CGGACACCAC CCACTACGCG
GCCAGCATGA TGAAGGTGGC CGTGCTGGTG GCGCTGTACC GGATCGTGGA GGCCGGACAC
CTCGACCCGG ACAGCGCCGT ACCGGTGCGC AACGAGTTCG ACTCCGCCCG GCCCGGCGCG
GCCCGGTTCT CCTGCGCCCG CCACTACGAC AACGACGACG CCGTCTGGGC CCGGGTTGGT
GACACCGCCC CGCTACGCTG GCTGGCCGAA CACATGATCA CCCGATCCAG CAACCTCGCC
ACCAACCTGC TGCTCGACCG GGTCGGCCTG CCGGCCGTCG CCGACGCCTG GGCCCGTGGT
GGGGCCCGGC ACAGCGTCAC CGGCCGCGGC ATCGAGGACT TCGCCGCCCG CGCTGCCGGC
ATCACCAACC TGGTCACCGC CGCCGACCTG GCCGCCCTCC TCGGCAACCT GGCGCTCGGG
GCCACCCAGC CCGGCCCGCT GGCCGCACCG GAGAGCTGCG CCGCCATGCT CGACATCCTG
ACCGGCCAGG AACATCGTGA GGACCTGGCC GCTGGCCTGC CCGCCGGCAC CCGCATCGCT
CACAAGAACG GCTGGGTACG CGGCGTGCGG CACAGCGCCG GCATCGTCTA CCCCGACGAC
GCACCCCCGT ACGTCATCGC CGTCTGCACC ACCGCCGACC CCACCGACGC CAGCCCGGAC
GACGATGCCT GCCAGCTCAT CGCCGACATC TCCGCTCGCG CCTTCGCGCA GCGCCACCAG
CTCGGCTGA
 
Protein sequence
MIFDGLDADL DRASGTVSAS LGRLGATPTW TRHPDTTHYA ASMMKVAVLV ALYRIVEAGH 
LDPDSAVPVR NEFDSARPGA ARFSCARHYD NDDAVWARVG DTAPLRWLAE HMITRSSNLA
TNLLLDRVGL PAVADAWARG GARHSVTGRG IEDFAARAAG ITNLVTAADL AALLGNLALG
ATQPGPLAAP ESCAAMLDIL TGQEHREDLA AGLPAGTRIA HKNGWVRGVR HSAGIVYPDD
APPYVIAVCT TADPTDASPD DDACQLIADI SARAFAQRHQ LG