Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2785 |
Symbol | |
ID | 5707864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3167112 |
End bp | 3167678 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272241 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001537611 |
Protein GI | 159038358 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.228174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00013029 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGACCGACG ACACCGAAGT CACCTCGTGG GCTCTCGAGG CGGGACGCGG TGATCGCGAT GCCGCCGCCG CCTTCGTCCG GGCGACCCAG CAGCAGGTCC GACGGTTCCT CGCCGCCCTG GTCTCTCCGG TCGAAGCGGA CGACCTGGCG CAGGAGACGT ACCTGCGCGC GCTGCGGTCG CTCCCCTCGT TCGCGGGCCG CTCCTCAGCG CGCACCTGGT TGTTCAGCAT CGCCCGACGG GTCGCGGTGG ACCATGTCCG GGCCGCCACG TCACGCCCGC GGACGATCCC CATGGCGGAC TCCCACGACG TCGCCGACGC CGACGGCAGC GGCTTCGACC GGCAGGTCGC CCTGGAACAG CTCATCGCGG CGCTGCCGGC CGACCGCAGG GAGGCATTCG TCGTCACCCA GGTACTCGGC CTGTCCTACG CCGAGGCGGC GGAGGTGTGC GGCTGCCCGG TCGGAACGAT CAGATCGCGG GTGTTCCGGG CTCGGGAGGA CCTGGTTGTC GCGCTGGAGA CGCGCTCCGG CGGGTCGTCC GACACCCGTG ACACCGCGGT GAGCTGA
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Protein sequence | MTDDTEVTSW ALEAGRGDRD AAAAFVRATQ QQVRRFLAAL VSPVEADDLA QETYLRALRS LPSFAGRSSA RTWLFSIARR VAVDHVRAAT SRPRTIPMAD SHDVADADGS GFDRQVALEQ LIAALPADRR EAFVVTQVLG LSYAEAAEVC GCPVGTIRSR VFRAREDLVV ALETRSGGSS DTRDTAVS
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