Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2714 |
Symbol | |
ID | 5706773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3092720 |
End bp | 3093934 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641272172 |
Product | major facilitator transporter |
Protein accession | YP_001537542 |
Protein GI | 159038289 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.773773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00188089 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCAGCG TCACCACCCC GGCCGCCCCC TCCGCCGTAT CCCGGTCGGT GCTGGCCGCC CGCACCGGTG TCGCGGTGGT GTTCGCGCTC AACGGCCTCG CCATCGGGTC CTGGTTCGCC CGGGTGCCGG CGGTCCGCGA GGCGCTCGAC CTCACCGCCG GCCGGCTCGG GCTGCTGCTG CTCGCGATGT CGGCGGGCGC GGTCGTGGCG ATGCCCACCT CCGGTCTGGT CGCCCAGCGG CTGGGCACCG CCCGGACGGT GGTGGTGGCG ACCCTGTTGG TCTCCACCGG CTTGCTGGTC GCCGGTGTCT CCGCCAGCGC GGCCGGATGG CTGCCTGGGG TAGCGGTCGG CCTGTTCGCC TTCGGCTACG GCACCGGCAC CTGTGACGTC GCGATGAACA TCGAGGGAGC CGCCGTCGAG CGGCGGATCG GCCGCACGAT CATGCCTCGG TTCCACGCCG CGTGGAGCCT GGGTTCGGTG GCCGGGGCGG GCCTCGGCGC GGTCGCCGCC CAGGTCGGGC TGGCGGTGGC CGTCCACCTG CCGCTCACCG CCGGGGCGGT GCTGGCCGGT ACGGCGCTCG GTGCCCGTGC GTTCCTGTCG GCCGTCGAGC CGGCGCCGGA CGCCGACGCG GTGTCCCCGG CGGCCCGTCG ACGCGCGCTG CTGGCCGCCT GGCGCGAGCC ACGGACCCTG CTGATCGGCC TGTTCGTGCT GGTCGCGGCG TTCAGCGAAG GGGCCGCCAC CGACTGGGTC GCGGTCGCGT TCGTCGACGG CTACGGCGTC AGCGAGGCCG CCGGGGCCGC CGTGTACGGA GTGTTCGTGA TCGGCATGAC CATCGGCCGG ACCGCCGGCA CACTCGCCCT GGACCGGTGG GGCCGGGTGC CGGTGCTCGG CGGCACGATC CTGCTCGCGG TGCTCGGCGT GAGTGTGGCG GTGCTGGCCG GTTCCGGGCC GGTGGCGGTC GCCGGCGTGG CGCTGTGGGG CCTCGGCGTC TCCCTCAGCT TCCCGATGGG CATGAGCGCG GCGGCCGACG AGGAGGACCG CGCCCCGGCC CGCGTCAGCG TGGTCGCCGT GATCGGCTAC ACCGCGTTCC TCGCCGGCCC GCCCCTGCTC GGCCTGCTCG GCGACCGCGT CGGGACGCTG CACGCCCTGC TGGTCGTACC GATCCTGCTG CTGCCGTCGC TCGCGTTGGT GCCGGTCACC CGACCTCCTC GCTGA
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Protein sequence | MSSVTTPAAP SAVSRSVLAA RTGVAVVFAL NGLAIGSWFA RVPAVREALD LTAGRLGLLL LAMSAGAVVA MPTSGLVAQR LGTARTVVVA TLLVSTGLLV AGVSASAAGW LPGVAVGLFA FGYGTGTCDV AMNIEGAAVE RRIGRTIMPR FHAAWSLGSV AGAGLGAVAA QVGLAVAVHL PLTAGAVLAG TALGARAFLS AVEPAPDADA VSPAARRRAL LAAWREPRTL LIGLFVLVAA FSEGAATDWV AVAFVDGYGV SEAAGAAVYG VFVIGMTIGR TAGTLALDRW GRVPVLGGTI LLAVLGVSVA VLAGSGPVAV AGVALWGLGV SLSFPMGMSA AADEEDRAPA RVSVVAVIGY TAFLAGPPLL GLLGDRVGTL HALLVVPILL LPSLALVPVT RPPR
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