Gene Sare_2714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2714 
Symbol 
ID5706773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3092720 
End bp3093934 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content76% 
IMG OID641272172 
Productmajor facilitator transporter 
Protein accessionYP_001537542 
Protein GI159038289 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.773773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00188089 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCAGCG TCACCACCCC GGCCGCCCCC TCCGCCGTAT CCCGGTCGGT GCTGGCCGCC 
CGCACCGGTG TCGCGGTGGT GTTCGCGCTC AACGGCCTCG CCATCGGGTC CTGGTTCGCC
CGGGTGCCGG CGGTCCGCGA GGCGCTCGAC CTCACCGCCG GCCGGCTCGG GCTGCTGCTG
CTCGCGATGT CGGCGGGCGC GGTCGTGGCG ATGCCCACCT CCGGTCTGGT CGCCCAGCGG
CTGGGCACCG CCCGGACGGT GGTGGTGGCG ACCCTGTTGG TCTCCACCGG CTTGCTGGTC
GCCGGTGTCT CCGCCAGCGC GGCCGGATGG CTGCCTGGGG TAGCGGTCGG CCTGTTCGCC
TTCGGCTACG GCACCGGCAC CTGTGACGTC GCGATGAACA TCGAGGGAGC CGCCGTCGAG
CGGCGGATCG GCCGCACGAT CATGCCTCGG TTCCACGCCG CGTGGAGCCT GGGTTCGGTG
GCCGGGGCGG GCCTCGGCGC GGTCGCCGCC CAGGTCGGGC TGGCGGTGGC CGTCCACCTG
CCGCTCACCG CCGGGGCGGT GCTGGCCGGT ACGGCGCTCG GTGCCCGTGC GTTCCTGTCG
GCCGTCGAGC CGGCGCCGGA CGCCGACGCG GTGTCCCCGG CGGCCCGTCG ACGCGCGCTG
CTGGCCGCCT GGCGCGAGCC ACGGACCCTG CTGATCGGCC TGTTCGTGCT GGTCGCGGCG
TTCAGCGAAG GGGCCGCCAC CGACTGGGTC GCGGTCGCGT TCGTCGACGG CTACGGCGTC
AGCGAGGCCG CCGGGGCCGC CGTGTACGGA GTGTTCGTGA TCGGCATGAC CATCGGCCGG
ACCGCCGGCA CACTCGCCCT GGACCGGTGG GGCCGGGTGC CGGTGCTCGG CGGCACGATC
CTGCTCGCGG TGCTCGGCGT GAGTGTGGCG GTGCTGGCCG GTTCCGGGCC GGTGGCGGTC
GCCGGCGTGG CGCTGTGGGG CCTCGGCGTC TCCCTCAGCT TCCCGATGGG CATGAGCGCG
GCGGCCGACG AGGAGGACCG CGCCCCGGCC CGCGTCAGCG TGGTCGCCGT GATCGGCTAC
ACCGCGTTCC TCGCCGGCCC GCCCCTGCTC GGCCTGCTCG GCGACCGCGT CGGGACGCTG
CACGCCCTGC TGGTCGTACC GATCCTGCTG CTGCCGTCGC TCGCGTTGGT GCCGGTCACC
CGACCTCCTC GCTGA
 
Protein sequence
MSSVTTPAAP SAVSRSVLAA RTGVAVVFAL NGLAIGSWFA RVPAVREALD LTAGRLGLLL 
LAMSAGAVVA MPTSGLVAQR LGTARTVVVA TLLVSTGLLV AGVSASAAGW LPGVAVGLFA
FGYGTGTCDV AMNIEGAAVE RRIGRTIMPR FHAAWSLGSV AGAGLGAVAA QVGLAVAVHL
PLTAGAVLAG TALGARAFLS AVEPAPDADA VSPAARRRAL LAAWREPRTL LIGLFVLVAA
FSEGAATDWV AVAFVDGYGV SEAAGAAVYG VFVIGMTIGR TAGTLALDRW GRVPVLGGTI
LLAVLGVSVA VLAGSGPVAV AGVALWGLGV SLSFPMGMSA AADEEDRAPA RVSVVAVIGY
TAFLAGPPLL GLLGDRVGTL HALLVVPILL LPSLALVPVT RPPR