Gene Sare_2351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2351 
Symbol 
ID5706935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2706116 
End bp2706883 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content67% 
IMG OID641271829 
ProductABC transporter related 
Protein accessionYP_001537200 
Protein GI159037947 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.234031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.139824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCGA CGGTAGGCCG TCAGGCGCAG GCCGCGGCCC GCGCGAGCGA GGTGTGGAAG 
GTGTACGGCA GCGGGGAGGC ACAGGTAGTC GCGCTACGCG GGGTCACCTG CGAATTCGAA
CAAGGCCGGT TCACCGCGAT CATGGGTCCG TCCGGGTCGG GCAAGTCGAC TTTGATGCAC
TGCCTCGCCG GGCTGGACTC GGTGACCCGG GGCACGGTGT CGATCGGCGA CACCACGGTC
ACCGGTCTGG GGGACGCCGG TCTGACCAAG CTACGCCGCG AACAGGTCGG TTTCATCTTC
CAACAGTTCA ACCTGCTGCC GACGTTGACC GCGAAGGAGA ACATCCTGCT GCCGCTGTCG
ATCGCCGGGC GGAAGCCGGA CCCAGCCTGG TACGACATGG TGATCGACAC TGTCGGCTTG
CGGGAACGGC TGGATCACCG GCCGGCACAG CTGTCCGGTG GGCAACAACA GCGGGTGGCG
TGCGCCCGGG CGCTGGTCAG TCGCCCACAG GTGATCTTCG CTGACGAGCC GACGGGCAAC
CTCGACTCAC GGGCCGGTGC GGAGGTGCTG AAGTTCCTGC GCAACTCGGT GCGCGAGCAC
GGCCAGACCA TTGTCATGGT CACCCACGAC CCGACCGCCG CCGCGTACGC CGATCGGGTG
GTCTTCCTCG CCGACGGGCA GATCGTCTCC GAGCTGATCG AGCCGACGGC GGAGACGGTG
CTGGACACGA TGAAGAAGCT CGACGCCCAG GTCGAGGTGG ACGACTGA
 
Protein sequence
MTATVGRQAQ AAARASEVWK VYGSGEAQVV ALRGVTCEFE QGRFTAIMGP SGSGKSTLMH 
CLAGLDSVTR GTVSIGDTTV TGLGDAGLTK LRREQVGFIF QQFNLLPTLT AKENILLPLS
IAGRKPDPAW YDMVIDTVGL RERLDHRPAQ LSGGQQQRVA CARALVSRPQ VIFADEPTGN
LDSRAGAEVL KFLRNSVREH GQTIVMVTHD PTAAAYADRV VFLADGQIVS ELIEPTAETV
LDTMKKLDAQ VEVDD