Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2351 |
Symbol | |
ID | 5706935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2706116 |
End bp | 2706883 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641271829 |
Product | ABC transporter related |
Protein accession | YP_001537200 |
Protein GI | 159037947 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.234031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.139824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGCGA CGGTAGGCCG TCAGGCGCAG GCCGCGGCCC GCGCGAGCGA GGTGTGGAAG GTGTACGGCA GCGGGGAGGC ACAGGTAGTC GCGCTACGCG GGGTCACCTG CGAATTCGAA CAAGGCCGGT TCACCGCGAT CATGGGTCCG TCCGGGTCGG GCAAGTCGAC TTTGATGCAC TGCCTCGCCG GGCTGGACTC GGTGACCCGG GGCACGGTGT CGATCGGCGA CACCACGGTC ACCGGTCTGG GGGACGCCGG TCTGACCAAG CTACGCCGCG AACAGGTCGG TTTCATCTTC CAACAGTTCA ACCTGCTGCC GACGTTGACC GCGAAGGAGA ACATCCTGCT GCCGCTGTCG ATCGCCGGGC GGAAGCCGGA CCCAGCCTGG TACGACATGG TGATCGACAC TGTCGGCTTG CGGGAACGGC TGGATCACCG GCCGGCACAG CTGTCCGGTG GGCAACAACA GCGGGTGGCG TGCGCCCGGG CGCTGGTCAG TCGCCCACAG GTGATCTTCG CTGACGAGCC GACGGGCAAC CTCGACTCAC GGGCCGGTGC GGAGGTGCTG AAGTTCCTGC GCAACTCGGT GCGCGAGCAC GGCCAGACCA TTGTCATGGT CACCCACGAC CCGACCGCCG CCGCGTACGC CGATCGGGTG GTCTTCCTCG CCGACGGGCA GATCGTCTCC GAGCTGATCG AGCCGACGGC GGAGACGGTG CTGGACACGA TGAAGAAGCT CGACGCCCAG GTCGAGGTGG ACGACTGA
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Protein sequence | MTATVGRQAQ AAARASEVWK VYGSGEAQVV ALRGVTCEFE QGRFTAIMGP SGSGKSTLMH CLAGLDSVTR GTVSIGDTTV TGLGDAGLTK LRREQVGFIF QQFNLLPTLT AKENILLPLS IAGRKPDPAW YDMVIDTVGL RERLDHRPAQ LSGGQQQRVA CARALVSRPQ VIFADEPTGN LDSRAGAEVL KFLRNSVREH GQTIVMVTHD PTAAAYADRV VFLADGQIVS ELIEPTAETV LDTMKKLDAQ VEVDD
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