Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2213 |
Symbol | |
ID | 5707461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2549639 |
End bp | 2550055 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641271694 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001537065 |
Protein GI | 159037812 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.557194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.22233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAAAAG GGACGATCGT TCGATTCGAT GACGTTCGTG GCTACGGGTT CATCGCACCG TTTGGGGGTG GAGATGACGT CTTTGTGCAC GCGAACGACT TCGGTGATCA GCGGCATGCT GTCGCCGCTG GTATGCGGGT GAGCTACGAG GTCGTGCAGT CCGAACGGGG TCTGAAGGTC GCGAGTGTCG TGCTGGAGTC GGCCCCGGCC AGCGGGCCGA ACCGGAGCAC GTCGACCCGT TCTCAGCCGC TGTCCGACGA GGAGGGCGAG TGCGACGTTC TGGCCGTTGG GCAGTTTGAA AGCTCCGTCG CTGAGCTGCT GCTGGCGAAT GTGCCCACGA TGACCGGCGC GCAGATTGTC GAGGCCCGCC GGGCACTGGT CACAATGGCC CGCCGATACG GCTGGGTCGA GGACTGA
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Protein sequence | MEKGTIVRFD DVRGYGFIAP FGGGDDVFVH ANDFGDQRHA VAAGMRVSYE VVQSERGLKV ASVVLESAPA SGPNRSTSTR SQPLSDEEGE CDVLAVGQFE SSVAELLLAN VPTMTGAQIV EARRALVTMA RRYGWVED
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