Gene Sare_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2213 
Symbol 
ID5707461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2549639 
End bp2550055 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID641271694 
Productcold-shock DNA-binding domain-containing protein 
Protein accessionYP_001537065 
Protein GI159037812 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.557194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.22233 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAAAAG GGACGATCGT TCGATTCGAT GACGTTCGTG GCTACGGGTT CATCGCACCG 
TTTGGGGGTG GAGATGACGT CTTTGTGCAC GCGAACGACT TCGGTGATCA GCGGCATGCT
GTCGCCGCTG GTATGCGGGT GAGCTACGAG GTCGTGCAGT CCGAACGGGG TCTGAAGGTC
GCGAGTGTCG TGCTGGAGTC GGCCCCGGCC AGCGGGCCGA ACCGGAGCAC GTCGACCCGT
TCTCAGCCGC TGTCCGACGA GGAGGGCGAG TGCGACGTTC TGGCCGTTGG GCAGTTTGAA
AGCTCCGTCG CTGAGCTGCT GCTGGCGAAT GTGCCCACGA TGACCGGCGC GCAGATTGTC
GAGGCCCGCC GGGCACTGGT CACAATGGCC CGCCGATACG GCTGGGTCGA GGACTGA
 
Protein sequence
MEKGTIVRFD DVRGYGFIAP FGGGDDVFVH ANDFGDQRHA VAAGMRVSYE VVQSERGLKV 
ASVVLESAPA SGPNRSTSTR SQPLSDEEGE CDVLAVGQFE SSVAELLLAN VPTMTGAQIV
EARRALVTMA RRYGWVED