Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2212 |
Symbol | |
ID | 5707460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2548701 |
End bp | 2549297 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271693 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001537064 |
Protein GI | 159037811 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.326547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.584634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCTCCG AGCACGAGCA TCGGCGCAAC GAGATCGCGG ATGCGGTACT GGCCATTGTC GCCGAACGCG GGCTGGCGGC CGTGTCCCTG GCCGCGGTGG CCGCCCAAGC CGGCGTGTCG CCCGGCCGGG TCCAGCACTA CTTCCCCGCC AAGCGAGAAC TGATCGAGGC CGCCTTCGAG CGGGGCAACG CCCTGTCCAG TGGCCGGATT GCCGCCAAGG CCGGACCCGA CGACCGGGAC GTCAGCCGAC GGCGCCTGCT CACCGTGGTG CTCACCGAAC TCATTCCGTA CGACGCCGTC ACCCGCGCCC ACCTGCGGGT ACGCCAGTCG TTCACCGCGG CGGCGCTGGC CGACGAGGCC ATCGCCGCCC GCCTGCGCGT CGACTACGCC CACCTGCACG ACCGACTCGC CGACCTGCTC CGCTACGACC AAGCCGCTGG GCGCCTGCGT GCCCAGACCG ATCCTGCGGA GGTGGCCGTG ACACTCGTGG CCCTCGCCGA AGGGTTGGCC TACTACGTAC TCATCGGCGT CCGTCCCGCC GAAGCCGCCC GTGACCAGGT ACTCGCCGCG ATCTCGGAGA TCTACGTGGC GGCGTGA
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Protein sequence | MGSEHEHRRN EIADAVLAIV AERGLAAVSL AAVAAQAGVS PGRVQHYFPA KRELIEAAFE RGNALSSGRI AAKAGPDDRD VSRRRLLTVV LTELIPYDAV TRAHLRVRQS FTAAALADEA IAARLRVDYA HLHDRLADLL RYDQAAGRLR AQTDPAEVAV TLVALAEGLA YYVLIGVRPA EAARDQVLAA ISEIYVAA
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