Gene Sare_0901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0901 
Symbol 
ID5706047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1012363 
End bp1013334 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID641270419 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001535809 
Protein GI159036556 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.549098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0315614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCA ACGGTGGGAC GAAAGCGATC CTCGCCGCGC TGTTGGCCAA CGCGGGCATC 
GCCGTCACCA AATTCGTCGC CTTTCTGCTG ACCGGCTCGT CGTCGATGTT GGCCGAGTCG
ATCCACTCGG TCGCCGACTC GGGCAACCAG GGGCTGCTGC TGCTCGGGGG GCGGCGGGCG
AAGCGTGCCG CCACCCCGCA GCACCCGTTC GGGTACGGCC GGGAGCGCTA CATCTACGCG
TTCATCGTGT CCATCGTGTT GTTCACCGTC GGTGGCCTCT TCGCCCTGTA CGAGGCGTAC
CACAAGTGGT CCCATCCGGA GGGCATCAAA AGTTGGCAGT GGGTTCCGGT CGTCGTCCTG
GTGAGCGCCA TCGTCATGGA GTCGTTCTCC TTCCGGACCG CGATCCAGGA GTCGAATCGC
GTTCGGGGAA ACCAGTCCTG GGTGCGGTTC GTCCGCCGGG CCAAGGCGCC CGAGCTGCCG
GTGGTGCTGT TGGAGGACCT GGGCGCGCTG GTCGGACTGA TCTTCGCGCT CTTCGGGGTC
GGCCTGACCC TGATCACTGA CGACGGCCGC TGGGACGCCG TCGGCACCGC GATGATCGGT
GTCCTGCTGG TGGTGATCGC CGTCATCCTC GCCATCGAGA CCAAGAGCCT GCTCCTCGGC
GAGGGTGCGG AGGCGCACGA TGTCGTGGCC ATCGAGAAGG CGATGACCGC CGGCCCCGAG
GTCGAGCGAA TCATCCACAT GAAGACGCTG TACCTCGGCC CCGACGAGCT GATGGTGGCG
GCGAAGGTCG CGGTGACGAC GGTGGACAGC GCCGAGGAAC TGGCCCGGGG CATCAACGCG
GTGGAGGCGA GGGTCCGCGC CGCCGTGCCG ATTGCCCGGG TGATCTACCT GGAGCCGGAC
GTCTATGTCG CGGCAGTGGA TAAGCGGACC GAAAGTGAAC CCGGCGAGAC CGTCGGGCTG
TCTGGGGGTT GA
 
Protein sequence
MSANGGTKAI LAALLANAGI AVTKFVAFLL TGSSSMLAES IHSVADSGNQ GLLLLGGRRA 
KRAATPQHPF GYGRERYIYA FIVSIVLFTV GGLFALYEAY HKWSHPEGIK SWQWVPVVVL
VSAIVMESFS FRTAIQESNR VRGNQSWVRF VRRAKAPELP VVLLEDLGAL VGLIFALFGV
GLTLITDDGR WDAVGTAMIG VLLVVIAVIL AIETKSLLLG EGAEAHDVVA IEKAMTAGPE
VERIIHMKTL YLGPDELMVA AKVAVTTVDS AEELARGINA VEARVRAAVP IARVIYLEPD
VYVAAVDKRT ESEPGETVGL SGG