Gene Sare_0319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0319 
Symbol 
ID5703614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp357575 
End bp359083 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content71% 
IMG OID641269845 
Productmembrane protein-like protein 
Protein accessionYP_001535240 
Protein GI159035987 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0495235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000246371 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTGTGGC CAGCCCGGCG GGTCGGTGGT GACTACGCTG ACGGCATGGC CGACACCCCG 
CCCGGCGTGC CCCCGCCGTC GCCGACCGCC GCCGCCCCGC CGGCCGCTCC CCGGATGCCG
TCCCGGCCCC GAAACTGGCG TCGTTTCCTC ATCCTCGCCG GGGTGATCCT GCTGATCGCG
GCCTGCGCCG TCTTCATGGT CTGGACTCTT GGCGAGAGCC TCGGTGGGGA GGCGCTGCTG
ATCGGTGTGA TCGCGGCGGT CCTTCCGGTC CCGGTACTGG TGTCCTGCTT CCTCTGGCTC
GACCGGTACG AGCCGGAGCC GTTGCGGTAC CTGGTCTTCT GCTTCGCCTG GGGCGCGTTC
GTGTCCACCG CGGCGTCGCT GGCGGTCAAC AGTTTCGCCG CGGACCGGTT CGAGGCGGCA
CAACTGCCGA CCTCGCTCAC GGCGGTACTG GTCGCGCCGT TCATCGAGGA GCTGACCAAG
GCCCTGGGGC CGATCCTGCT GTTGATCTTC CGGCGTCGGG AGATCTCCGG GATCACCGAC
GCCCTGGTCT ACTGCGGGCT CTCCGCGATC GGTTTCGCGA TGGTGGAGAA CATTCTCTAC
CTGGGCGGCT ACGGATATCG GACGGGTGTG GAGGAGTACG GTCCGGCCAC CGGCACACAG
CAGGTCATTG CGATCTTCAT CGTACGGATC CTGCTGTTCG GCTTCGCCCA CCCGCTGTTC
ACCTCCATGA CCGGGGTGGG GCTGGGTATC GCCGCCCGCA CCGCGGACCG GCGGGTACGG
GTCCTGGCGC CGGCGGCCGG CCTGTTGCTG GCGATGATGT TGCACGGCAC CTGGAACCTG
CTACCGACGC TGACCCAGGC CACCGGACAA CTGCTGATCC TGCTCTACGG CTTCATCGGC
GTCATGGTGC CGATCTTCTT TGGCATGGTC GGGCTGGCCA TCTGGCTGCG ATCCTGGGAG
GGGCGGCTCA CCGAGCGAAT CCTGCCCGAC TACGTCCGCT CCGGCTGGCT CACCCCGCCC
GAGGTGGCGG CGTTGAGCAG TCTCGGACGG CGACACGCCG CCCGGGTGTG GGCCAAGCGG
GTTGGTGGCG ACCCGGGGCG CAAGGCGATG CGCGGCTACC AGTTTGCCGC CACCCGGCTC
GCGCTGCTGC GCGACGGGAT GCGCCGCGGG CTGGACGACC GCCCCGCCGA ACGGGAGCGG
TCCGTCGCCG AGGAGCGATA CCTGCTGGAA CTGATCAGCG GCTACCGAGC GTTCTTCGTC
GGCCGGGATC CACGCGCCCC GGCCGGGGTC TGGGACGGGC ACCAGTACCA CCTGCGGTTC
CCGGACGGGT CGCAGCGCGC GGTGTCGGCA CCGGACGAGC CGGTGGTGCC GATCCCGGTC
GTGCTCGCAC CGCCGCCTCC ACCGCCCGCG TTCCCGCCCG GCTATCCGCC ACCAGGCTGG
CACGGTCCGC CGGCTCCCGG GCCATCCGGT TGGCACGGCC CGCCGACCTC CGGGCCATCT
GGCCGGTGA
 
Protein sequence
MVWPARRVGG DYADGMADTP PGVPPPSPTA AAPPAAPRMP SRPRNWRRFL ILAGVILLIA 
ACAVFMVWTL GESLGGEALL IGVIAAVLPV PVLVSCFLWL DRYEPEPLRY LVFCFAWGAF
VSTAASLAVN SFAADRFEAA QLPTSLTAVL VAPFIEELTK ALGPILLLIF RRREISGITD
ALVYCGLSAI GFAMVENILY LGGYGYRTGV EEYGPATGTQ QVIAIFIVRI LLFGFAHPLF
TSMTGVGLGI AARTADRRVR VLAPAAGLLL AMMLHGTWNL LPTLTQATGQ LLILLYGFIG
VMVPIFFGMV GLAIWLRSWE GRLTERILPD YVRSGWLTPP EVAALSSLGR RHAARVWAKR
VGGDPGRKAM RGYQFAATRL ALLRDGMRRG LDDRPAERER SVAEERYLLE LISGYRAFFV
GRDPRAPAGV WDGHQYHLRF PDGSQRAVSA PDEPVVPIPV VLAPPPPPPA FPPGYPPPGW
HGPPAPGPSG WHGPPTSGPS GR