| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3359 |
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| Symbol | |
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| ID | 4605606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3986603 |
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| End bp | 3987493 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782779 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_929231 |
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| Protein GI | 119776491 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAC TCCCTCCGCT TCGTGCACTG CAGGTTTTTG AAGCTGCGGC CCGTCATCTG
CACTTTTCCC GGGCCGCTGA AGAGTTGTGC CTGACCCAAA GCGCCGTTTC ACATCAGGTC
AGGGGATTGG AGCAACATTT GGGGCAAACC CTGTTTGCAC GACGGGGCCG CGAACTGGCG
CTGACCCCCA AGGGAGAACA GCTTTTTCTG GCGGTGCAGT CGGCGCTGGA TGGTCTGGAT
AGCCTTTGTC GCCAGTTGAA TGAGGCTGAA AGCCGTGAAC TTCGGCTGGC GGTGTACAGC
TCCTTCGCCG TGAAGTGGTT GATACCGAGA CTGGGCGACT TTCGCCGTCA GCATCCGGGG
ATCAAAATTC ACCTCGAGAT GGTCAGCGGC GACCCGCCGT TGTCGGATCA GGTGGCGGAT
ATGTTTATCT GCGGTGAGCA GCATCAACGT GGGTTTTGGC AGACACTGCT GAGGCCTGAG
CGGCTTATTC CCGTGTGCAG TCCGGCATTG GCCAATGCCC TTGGCGAAGC CCTGGTCATG
CCGCTGCGAC TTGACAGCCT GCCGCTGCTT TCAGTTGACG AAGCAGACAT AGGACCAGAC
TGGGCACGCT GGGCAAAGTC ACAGGCGCAA ACTCTGACCC AGGCGCAGTT GCAGAGCTAC
AGCCATGTAC TGCTGGCGAT AGAAGCGGCC ATTGCCGGTC AGGGCATAGC TCTGGCATCG
GATTTCATTG TGGAAGGCGA CATCGCCGCG GGAAAGCTGA TGGCGCTACC CTGGCCGGCA
CTGGAAACCG GGTTTGGTTT TCACTTCTGT TGCCGGGAGC GGCGTTTGAA AGAGCCTGCA
ATGGCCGCCT TTGCCGAATG GATCCAGCAA CAAGCCGCGA TGGCCGGATA G
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| Protein sequence | MRKLPPLRAL QVFEAAARHL HFSRAAEELC LTQSAVSHQV RGLEQHLGQT LFARRGRELA
LTPKGEQLFL AVQSALDGLD SLCRQLNEAE SRELRLAVYS SFAVKWLIPR LGDFRRQHPG
IKIHLEMVSG DPPLSDQVAD MFICGEQHQR GFWQTLLRPE RLIPVCSPAL ANALGEALVM
PLRLDSLPLL SVDEADIGPD WARWAKSQAQ TLTQAQLQSY SHVLLAIEAA IAGQGIALAS
DFIVEGDIAA GKLMALPWPA LETGFGFHFC CRERRLKEPA MAAFAEWIQQ QAAMAG
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