| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2919 |
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| Symbol | |
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| ID | 4605166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3470807 |
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| End bp | 3471580 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639782330 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_928791 |
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| Protein GI | 119776051 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.357868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.238188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATT ATGCTTCCTT TCCGGATCAA AGGCAAACCC TGATTAAAAC GCGCCTGCTA
CAGGATGGCA GAGTCGTCTG CGCTCAGCTC GCAGCCGAAC TGGGTGTATC TGAACACACT
ATCCGGCGCG ATTTGCAGGA ACTGGCCAGT CAGGGCGTTT GCAAAAAGGT CTATGGCGGC
GCTGTGAATG TGGTGGCAGA TCCGCCGGGT TTAGCCGAGC GCATTCATCT GACAGGTGAA
GAAAAGCAGA AACTTGGCCG GGCCAGTGCG CAGCTTTTGC GGGCCGGTGA TTGCGTTTTT
GTGGATTCGG GCAGCACCAA TATGGCAATC GCCAAAGCGA TAAGCCAGCA GCAAGCCATC
ACCTTTGTTA CCCATGTGCC TGAAATTGCG GTTGAATTGC TGAAGTTGGC GCACTGTGAA
GTGATTTTGT TGGGGGGGAA ACTGAACCGG AAGATTGGCG CATCGGTTGG CCCCGCAACC
ATCAGGCAGC TGGAAACCAT GTACTTCGAC CAATGCCTGC TGGGAGCCTG CGCACTCGAC
CCTGAAGAAG GGGTGACGGT ATTTGATTTC GATGATGCAG AATTTAAACG GACTATCGTC
AAGCAAAGCA GTGAGGTTAT TGTTGCGCTG ACCCAAGACA AGTTGGGGAC GGTAGCCAAA
CACAGGGTGA TGCAGGTGAG TGAGATTTCC ACTCTGGTGC TTGCAGGCGC GTCTGTGCCG
GGTGTGCTGG CAAAGTTGGC ACAATCAAAC GTCAATATTG TGCAGGCAGA TTAA
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| Protein sequence | MLDYASFPDQ RQTLIKTRLL QDGRVVCAQL AAELGVSEHT IRRDLQELAS QGVCKKVYGG
AVNVVADPPG LAERIHLTGE EKQKLGRASA QLLRAGDCVF VDSGSTNMAI AKAISQQQAI
TFVTHVPEIA VELLKLAHCE VILLGGKLNR KIGASVGPAT IRQLETMYFD QCLLGACALD
PEEGVTVFDF DDAEFKRTIV KQSSEVIVAL TQDKLGTVAK HRVMQVSEIS TLVLAGASVP
GVLAKLAQSN VNIVQAD
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