Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2753 |
Symbol | |
ID | 4605000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3291091 |
End bp | 3292563 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782164 |
Product | Na+/H+ antiporter |
Protein accession | YP_928625 |
Protein GI | 119775885 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
TIGRFAM ID | [TIGR00775] Na+/H+ antiporter, NhaD family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.709731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAA AGCATTTGAA TGGGGGAGTC CATCGTATCG CAGGGATGGC GATTTCTTTC ATGTTGGCGC TGTTTGCGCC TGCGGCTTTG GCAAGCAGTG GTAGCGGTGG TGAATGGCTC GATTTGACCG GCGCCACTGT GGGATACCTG GCCATCACGA TTTTCGTATT GGCCTATATC CTGGTGATGC TGGAAGAGAA GCTGCATCTG CGCAAGTCCA AACCGGTGCT GGTGGCTGCC GGGATTATCT GGGGCATGTT GGGATTTGTC TATTCTCAGC ATGGCATGCC TCAGGTGGCT GAAGAGGCCT TTAAGCACAA CCTGCTGGAA TATGCTGAGC TGCTGCTGTT CCTCTTGGTG GCCATGACCT ATATCAACGC CATGGAAGAG CGCGGCCTGT TCGATGCCTT GCGTGCCTGG ATGGTGAGTC GGGGCTTTAG CCTGCGCCAG GTGTTCTGGC TTTGTGGCAT TCTGGCCTTT TTTATCTCGC CGGTGGCGGA TAACCTGACC ACGGCACTGC TGATGTGCGC CGTGGTGATG AAGGTCGGTG GCGATAATCG TCGCTTTATC GGCATTGCCT GTATCAATAT TGTGGTTGCG GCCAACGCAG GCGGCGCCTT CAGTCCCTTT GGTGATATCA CCACCCTGAT GGTGTGGCAA AAGGGCATAG TGCCCTTTGG TGAGTTCTTT GACCTCTTCA TTCCTGCCGT TGTGAACTTT ATGGTGCCGG CGCTGGTGAT GAGCTTTTTT ATCGGTAACG AGCGGCCTGC AGCCGTATCG GAGCGGGTAT TTATGCGCCG CGGTGCCAAG CGCATTGTCG CCTTGTTTTT ACTGACCATC GCCTCAGCAG TATTGGCGCA TTCTATGCTG GGCATGCCAC CTGTGCTGGG GATGATGACA GGCCTTGGAT TCCTGCAATT CTTTGGCTTT TTCCTGCGCA AAACCTTCAA CCACTCCGTT GCCAAGGCGA TTGCCAAGGC CGAAGCCGAG AAAAACCGGG AGCGTTTGAC TTACTTGGGT AACGTGGTTC CTTTCGATGT ATTCAGCCGG GTAGCGCGCG CCGAATGGGA TACCCTGCTG TTTTTCTACG GGGTGGTGCT CTGTGTGGGA GGTCTGGGCT TTATGGGGTA TCTCAGCCTG GTATCTGAAG CCATGTATAC CCATTGGGAT GCCACCTATG CCAACATCAC GGTCGGCCTG TTGTCCGCCG TTGTGGACAA TATCCCTGTG ATGTTTGCCG TACTGACCAT GAATCCGGAT ATGGCACTGG GGCAGTGGCT GCTGGTTACC CTGACCGCCG GTGTGGGCGG CAGCCTGCTG TCTATTGGCA GCGCCGCCGG GGTGGCACTC ATGGGGCAGG CGCGTGGGAT ATACACCTTC GGCACTCATC TCAAGTGGAC ACCTGTGATT GCCCTGGGGT ACGTCGCGAG CATTCTGGTG CACATGTGGT TGAACGCCGC AACCTTTCAT TGA
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Protein sequence | MKAKHLNGGV HRIAGMAISF MLALFAPAAL ASSGSGGEWL DLTGATVGYL AITIFVLAYI LVMLEEKLHL RKSKPVLVAA GIIWGMLGFV YSQHGMPQVA EEAFKHNLLE YAELLLFLLV AMTYINAMEE RGLFDALRAW MVSRGFSLRQ VFWLCGILAF FISPVADNLT TALLMCAVVM KVGGDNRRFI GIACINIVVA ANAGGAFSPF GDITTLMVWQ KGIVPFGEFF DLFIPAVVNF MVPALVMSFF IGNERPAAVS ERVFMRRGAK RIVALFLLTI ASAVLAHSML GMPPVLGMMT GLGFLQFFGF FLRKTFNHSV AKAIAKAEAE KNRERLTYLG NVVPFDVFSR VARAEWDTLL FFYGVVLCVG GLGFMGYLSL VSEAMYTHWD ATYANITVGL LSAVVDNIPV MFAVLTMNPD MALGQWLLVT LTAGVGGSLL SIGSAAGVAL MGQARGIYTF GTHLKWTPVI ALGYVASILV HMWLNAATFH
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