| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2744 |
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| Symbol | |
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| ID | 4604991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3279641 |
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| End bp | 3282844 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782155 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_928616 |
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| Protein GI | 119775876 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCC ACAAAGGTAT AATTGCGTGG TTTGCCCGCA ACAGTGTGGC GGCCAACCTG
CTGATGATAG TGCTGCTGGT TGGCGGCCTA TTCAGCACCC AGCTGATTAA CAAAGAAATA
TTCCCAAGCT TCGAACTGAA CCTGCTCAGA ATTTCCGTCG CCTATCCCGG CGCCGCACCA
CAGGAAATCG AAGAAGGGAT CAACATCAAA ATCGAAGAAG CCATTCAGGA TGTTATCGGC
ATTAAAAAGC TGACCTCGGT GGCAAGCGAT GGTGTGGGCA GTATCACCAT CGAAGTGGAA
AACGGTGTGG ACGCCAAAAC CGTGCTGGAT GAGGCCAAGC TGCGTATCGA TGCCATTTCC
ACCTTTCCGG CCAACATCGA AAAACCCAAC ATTTATCAGA TAAAGCCTGA AAACAACGTA
ATTTGGCTGT CTGTGTATGG CGATATCAAC GCCCACGAGA TGAAAGAGCT GGCCAAAAAT
ATTCGTGACG AAGTGGCCGC CCTGCCCTCT GTCACCCGCG CCCAGGTTGC CGGTGCCCGC
AATTACGAAA TCGGCATCGA AGTGTCGGAA AACAAGTTGC GTGAGTATGG CCTCACCTTC
ACCCAGGTGG CCATGGCGGT GCAAAACTCC TCGCTTGACC TGCCCGGCGG TGCCATTCGC
GCCAAAGACG GCGATATTCT GCTGCGTACC AAGGGACAGG CCTACACCGG CGAAGACTTC
TCCAGCATAG TGGTTGCCAC CAGCAAAGAT GGCAGTCGCA TCATGCTGCC GGACGTCGCC
ACCATCAAGG ATGATTTCGA AGAGCGCCTC GACTATACCC GCTTCAACGG CAAACCCGCG
GTGATAGTGG AAGTTCTGAG CGTAAAAGAT CAGGACGCCG TGGCCATCGC CAAGGATGTG
AAGGACTACA TCGCCGAGCG CAAACTCAGT TTGCCCGCCG GTGCCGAGCT CGATTACTGG
GGCGATTTGA CCCACTACCT CAACGGCCGC CTCAATATGA TGCTGTCGAA TATGACCATG
GGTGCCCTGC TGGTGTTTGT GATCCTGGCG CTGTTCCTCG ATTTGAAACT GGCATTCTGG
GTGATGGTGG GGATCCCCGT GTGTTTCCTT GGCACCCTGC TGCTGATGCC GGTAGAACCC
TTTGCCCTTT CCATCAATAT GCTGACTCTA TTTGCCTTTA TTCTGGTGCT GGGGATATTG
GTGGATGATG CGATTGTGAT TGGGGAGAGC GTCCACACCG AGGTGGAACG CCACGGTCAC
AACATGGACA ACGTCATTCG CGGTGCCCAG AAGGTGGCCA TGCCCGCCAC CTTCGGCGTA
CTGACCACAA TCGCGGCCTT TATTCCCATG TTGATGGTGG ATGGCCCCAT GGGGATCATC
TGGAAATCCA TCGGTATGGT GGTGATCCTC TGTCTGGCGT TTTCTCTGGT GGAATCCAAG
CTTATTCTGC CCGCGCATCT TGCCCATATG AAGCCAAACA CCAAGGAGCC TTCGGGCCCA
CTCGGCCGCA TGAAGCTGCG ATTCAATGAG CGGGTAGCCC ACTTTATTCA CCACAGCTAC
AAGGCGTTTC TTGAGCGTGC CATTCACAAC AGATACAACT GGCTGGCCGG CTTTACCGGG
GTCTTGATCC TCTCCATCGC CCTGGTCGCC AGTGGTAAGG TGCGCTGGGT ATTTTTCCCC
AGCATTCCCT CTGACTTTGT GCAGGTAAAT CTTCAGATGG AAGAAGGCAG CTCAGAGGAC
AACACCCTCA AGGCGCTGCA ACAAATCGAA GATGCCCTCT ACCGCATGAA CGGTGAAATG
GAGCAAAAGT ACGGTGAGCC GGTGGTGAAA CACAGCTTCT TCAATATGAA CTCCCGCACC
AGTGCCTTTA TCTTTGCCGA GCTGACCAAA GGGGAAGACC GCGAGCTGGA TGGCAACGCC
ATTACCGACG CCTGGCGTGA CGCCCTGCCA GAAATGGTGG GCGTGAAGAA ATTGTCCATG
AATGCCACCA CCAACGATGC CGGTGGCGAT GTGGCATTCC GCCTGTCATC CAACGACCTT
GAGCAATTGT CGCTGGCCGC CAAAGAGCTT AAAACCAAGC TGGCAAGCTA CGAAGGCCTG
TACGATATCG CCGACAACTA TTCCTCCGGC AGCCATGAAA TCCGCCTGAA AATTCGCCCC
GAGGCAGAGG CCCTCGGTCT GACACTGTCA GATCTGGCAC GCCAGGTACG CTATGGCTTT
TATGGCTACG AGGCCCAGCG CATTTTGCGC AACAAGGAAG AAGTGAAGGT GATGGTGCGC
TATCCACTGG AGCAGCGCCG TACCGTGGGC CATCTGGAAA ACATGCTCAT CCGTACGCCC
GATGGCAGCG CAGTGCCTTT TGCCAACGTG GCCGAAATCG AGGTGGGCGA CTCTTACTCG
GCCATTACCC GGGTAGATGG TCGCCGTGCT ATCACCATCA CGGCCGCCGC CAACAAGGAC
AAGGTCGAGC CGGGCAAGGT GGTCGCCGAG ATTCAGAAAG ACTTTATGCC AGTGCTCAAG
CAAAAGTACC CTCATATAGA CACCTCCCTC GATGGTCAGA GTCAGGAAGA GGCTGATGCC
ATTTGGGGTC TGCTGCAGGG TTTGTTCTTT GCCCTCTTTA CCATCTATGC CCTGATGGCT
ATACCGCTGA AGTCCTACAG CCAGCCGATG ATCATCATGT CGGTGATCCC CTTTGGCATG
ATTGGCGCCA TCATAGGTCA CCTGCTGCTG GGCTTGTCCC TCAGCGTCCT CAGCCTCTGT
GGTATTATCG CCCTGGCCGG TGTGGTGGTG AACGACTCGC TTATCCTGGT GGACTTTGTT
AACCGCGCCC GGGCACAGGG TTTTGCCCTG CGTGAAGCCG TGGTCAATGC TGGCTGCTTC
CGTTTCAGGG CAATCATTCT GACCTCGCTG ACCACCTTCT TTGGCCTGGT GCCCATCATC
CTTGAGCGCA GTTTGCAGGC ACAGATAGTG ATCCCCATGG CCACCTCACT GGCGTTCGGG
ATCCTCTTCT CCACCGTGGT GACCCTGATA TTGGTGCCCT TGCTGTATGT GATACTGGCC
GACTTTGCCA GTATTGGCCG CCGCCTGTTC AACTGGTGGT GGCAGCCAGG CCAGGGGCAC
AATGAGCATG GCGCTGCTGC CGGGCAGGGT ACAGAACAAG GTGCATCGCT GACGCAGTCC
CTCGAGGGGG CAAAACACGA CTGA
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| Protein sequence | MDTHKGIIAW FARNSVAANL LMIVLLVGGL FSTQLINKEI FPSFELNLLR ISVAYPGAAP
QEIEEGINIK IEEAIQDVIG IKKLTSVASD GVGSITIEVE NGVDAKTVLD EAKLRIDAIS
TFPANIEKPN IYQIKPENNV IWLSVYGDIN AHEMKELAKN IRDEVAALPS VTRAQVAGAR
NYEIGIEVSE NKLREYGLTF TQVAMAVQNS SLDLPGGAIR AKDGDILLRT KGQAYTGEDF
SSIVVATSKD GSRIMLPDVA TIKDDFEERL DYTRFNGKPA VIVEVLSVKD QDAVAIAKDV
KDYIAERKLS LPAGAELDYW GDLTHYLNGR LNMMLSNMTM GALLVFVILA LFLDLKLAFW
VMVGIPVCFL GTLLLMPVEP FALSINMLTL FAFILVLGIL VDDAIVIGES VHTEVERHGH
NMDNVIRGAQ KVAMPATFGV LTTIAAFIPM LMVDGPMGII WKSIGMVVIL CLAFSLVESK
LILPAHLAHM KPNTKEPSGP LGRMKLRFNE RVAHFIHHSY KAFLERAIHN RYNWLAGFTG
VLILSIALVA SGKVRWVFFP SIPSDFVQVN LQMEEGSSED NTLKALQQIE DALYRMNGEM
EQKYGEPVVK HSFFNMNSRT SAFIFAELTK GEDRELDGNA ITDAWRDALP EMVGVKKLSM
NATTNDAGGD VAFRLSSNDL EQLSLAAKEL KTKLASYEGL YDIADNYSSG SHEIRLKIRP
EAEALGLTLS DLARQVRYGF YGYEAQRILR NKEEVKVMVR YPLEQRRTVG HLENMLIRTP
DGSAVPFANV AEIEVGDSYS AITRVDGRRA ITITAAANKD KVEPGKVVAE IQKDFMPVLK
QKYPHIDTSL DGQSQEEADA IWGLLQGLFF ALFTIYALMA IPLKSYSQPM IIMSVIPFGM
IGAIIGHLLL GLSLSVLSLC GIIALAGVVV NDSLILVDFV NRARAQGFAL REAVVNAGCF
RFRAIILTSL TTFFGLVPII LERSLQAQIV IPMATSLAFG ILFSTVVTLI LVPLLYVILA
DFASIGRRLF NWWWQPGQGH NEHGAAAGQG TEQGASLTQS LEGAKHD
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