| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2704 |
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| Symbol | |
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| ID | 4604951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3235328 |
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| End bp | 3236488 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639782115 |
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| Product | sterol desaturase |
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| Protein accession | YP_928576 |
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| Protein GI | 119775836 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3000] Sterol desaturase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGC AGTATCAATA TCAGCAAAGG GACGTGCCCC CACGCCCCCA CAAAGCCTTC
CGACTCGGGG AAGGGAAAAT CAGCGGCTTT GCCAGCGTAT GTTTAGGGGC GCTCAGCCTA
TTAGCCGTGC TGGCCTATCT TTATCCCTCT TATCTCACCA CCACAGAACT CAGGGCAGTT
TACGACGCCA AAGAACTTCA GCAAGTGCTG AAATACGGCA TGTATTTTTC GCTCTTTTTT
GGATTGCTGA CTTTTGTGCT GGGTGGCTAT CGCCGGCTGG GATTAACCGG TATCGGCCTC
ACAAGTACTG CGTTTTTGCT GGGTGGCTGG CAAATTCCTG TGGGCCCCGT TGCGCCCAAA
GCGCTCTCAC TCGGTGTGGA TTGGCTCATC CTGGCGTTTT TGGGGTCGGT GTTTATTTTT
ATGACCCTGG AGAAACTGCT GCCAAGGTAT AAAGATCAGG TGATTTTGCG CCCCGGATGG
GGGCTGGATC TCTGGTATTT CGTATTCAAC CATTTGGCGA TTTCCGCCAT CCTGCTGTAC
GCGAACTACC ATGTTAGCCA CTTCCACTGG GCGGTCAGCG ACGAGGTACA GGCCTGGGTT
CAGGCATTGC CACTGTGGGT GCAGGTGGTG GCCATTATCC TCGCGGCCGA TTTTGTCCTC
TACTGGGAAC ATCGTCTGTT TCACGAAGTC GGCTTTTTGT GGCCCATTCA TGCGGTGCAT
CACTCGGTGG AAGATTTAGA CTGGCTCGCG GGCTCCCGAG GTCACTTTAT TCAGATGTTC
TCCGAACGTG CCATGGTGAT GGTGCCCCTT TATCTCCTTG GGCCTGACAA GGCCGCGCTC
GACATCTACG TGGCCTTTGC GGCGCTGCAG GCGGTGCTTA TCCATTGCAA CACCCGACTG
CATTTTGGCC CCATCAAGTA CCTGTTGGTG ACGCCCTGGT TCCACCACTG GCATCACAGC
TCGGAAAAAC CGGCCATAGA TACCAACTAT GGCGCGCACA CTCCCATTTA CGACTGGTTG
TTCGGCACCC TGCATGTGCC ATCACAGCAC TGGCCCGCCC ACTATGGCAC CACCAAGCCC
CTGCCCCGGA CCTTCATGGG ACAGCTCAGC TATCCCTTCG CCTGTTGGCT GGCCAGGCGC
AAAACCAAGG GCGCTGACTG A
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| Protein sequence | MDEQYQYQQR DVPPRPHKAF RLGEGKISGF ASVCLGALSL LAVLAYLYPS YLTTTELRAV
YDAKELQQVL KYGMYFSLFF GLLTFVLGGY RRLGLTGIGL TSTAFLLGGW QIPVGPVAPK
ALSLGVDWLI LAFLGSVFIF MTLEKLLPRY KDQVILRPGW GLDLWYFVFN HLAISAILLY
ANYHVSHFHW AVSDEVQAWV QALPLWVQVV AIILAADFVL YWEHRLFHEV GFLWPIHAVH
HSVEDLDWLA GSRGHFIQMF SERAMVMVPL YLLGPDKAAL DIYVAFAALQ AVLIHCNTRL
HFGPIKYLLV TPWFHHWHHS SEKPAIDTNY GAHTPIYDWL FGTLHVPSQH WPAHYGTTKP
LPRTFMGQLS YPFACWLARR KTKGAD
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