| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1004 |
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| Symbol | |
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| ID | 4603256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1215224 |
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| End bp | 1216621 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780343 |
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| Product | U32 family peptidase |
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| Protein accession | YP_926881 |
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| Protein GI | 119774141 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.995229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC CTGAGCTTCT GTCGCCGGCA GGCACACTGA AAAACATGCG CTACGCCTTT
GCCTATGGTG CAGATGCCGT GTATGCGGGT CAGCCCAGAT ACAGTCTGCG CGTCCGCAAC
AACGACTTTA AACTGGAAAA CCTGAAGACA GGTATTGAAG AGGCTCACAG CCTTGGCAAA
AAATTGTATG TGGTGAGCAA CATTGCCCCC CACAACGCCA AGCTGAAAAC CTATCTCGAC
GACATGGCGC CCGTGGTTGC CATGAAGCCG GACGCCCTCA TCATGTCAGA CCCAGGCCTG
ATTATGATGG TACGCGAAGC CTTCCCTGAC CAGGTCGTGC ACCTGTCGGT ACAGGCCAAT
GCCATCAACT GGGCCTCGGT TAAGTTCTGG CAGTCGGTTG GCATCAAGCG CGTTATTCTG
TCCCGCGAGC TGTCGCTGGA TGAAATCGAA GAAATCCGTC AGCGCTGCCC GGACATCGAG
CTCGAAGTGT TCGTACACGG CGCCCTGTGT ATGGCCTACT CTGGCCGCTG CCTACTGTCT
GGCTATATTA ACAAGCGCGA CCCCAACCAG GGCACCTGCA CCAATGCTTG CCGTTGGAAG
TATGACGCCC ACGAAGCCAC CGAAAACGAA GCCGGTGACG TTGTGGCCAT CCACACCCCG
GAAAGTGCCG TGCAGCTGGA AACCCCAACG CTCGGAAACG GCCCTGCCAC CGACAAAATC
TTCCTGCTGC AGGAAGAAAA CCGTCCCGGG GAATACATGC CAGCCTTTGA AGACGAGCAT
GGCACCTACA TCATGAACTC CAAAGATCTG CGTGCCATCC AGCACGTGGA GCGTCTGGCC
AAAATTGGCG TGGATTCACT GAAAATTGAA GGCCGTACCA AGTCCTTCTA CTACGTGGCC
CGTACTGCTC AGCTGTACCG TCAGGCCATT GAAGATGCCG TGGCCGGTCG TGGTTTTGAC
CCACACCTGA TGACCCGCCT CGAAGGTCTG GCTCACCGCG GTTACACCGA GGGCTTCCTG
CGTCGCCACG TGCACGATGA ATACCAGAAC TACGACTACG GCTATTCCAT CAGCGACAGC
CAGCAGTTTG TGGGTGAATT TACCGGTAAG CGCAACGAAG CAGGCCTGGC CGAAATCGAT
GTGAAAAACA AGTTCATTGT GGGCGACAGT GTTGAGCTGA TGACCCCCCA GGGCAATATC
AACCTGACCG TAGACACCCT CTACAACCGT AAGGGTGAAG CCGTTGATGC CGGTCTGGGT
TCAGGCCACA TGGTGTACCT GCCGGTGCCT GCCGAGGTGG ATGTGAACAT GGGCGTGCTG
CTGCGCAACC TGCCAAACGG CAACAACACC CGTAATCCAC ACGGCGAAGC GGAAGTGATC
CCCACCAAGG TGGAATAA
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| Protein sequence | MFKPELLSPA GTLKNMRYAF AYGADAVYAG QPRYSLRVRN NDFKLENLKT GIEEAHSLGK
KLYVVSNIAP HNAKLKTYLD DMAPVVAMKP DALIMSDPGL IMMVREAFPD QVVHLSVQAN
AINWASVKFW QSVGIKRVIL SRELSLDEIE EIRQRCPDIE LEVFVHGALC MAYSGRCLLS
GYINKRDPNQ GTCTNACRWK YDAHEATENE AGDVVAIHTP ESAVQLETPT LGNGPATDKI
FLLQEENRPG EYMPAFEDEH GTYIMNSKDL RAIQHVERLA KIGVDSLKIE GRTKSFYYVA
RTAQLYRQAI EDAVAGRGFD PHLMTRLEGL AHRGYTEGFL RRHVHDEYQN YDYGYSISDS
QQFVGEFTGK RNEAGLAEID VKNKFIVGDS VELMTPQGNI NLTVDTLYNR KGEAVDAGLG
SGHMVYLPVP AEVDVNMGVL LRNLPNGNNT RNPHGEAEVI PTKVE
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