| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0655 |
|---|
| Symbol | |
|---|
| ID | 4602908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 811146 |
|---|
| End bp | 812402 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639779990 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_926533 |
|---|
| Protein GI | 119773793 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACTC ACAACAAACT GGCCGCTGCG GTATTGATGT CACTGATGCT TAGCGCCTGT
CAGGGAGAAA ACAGCCAAGA CAACGCCGCA GCCATGGGAG CGCAGTTGGT ACAGCTGTCT
CCTCTGTCCT CTGGCGACAT GGGTTTTAGC CAGATTCAGG CGCCTGTCAC ACAAGGGCTA
AACACTCGCC GGGATGACAT CCAATTTGTG TCCCCTATGT CGGGTGAATA TCAGCCCCGA
CAATGGCAAA GAAGCCAATT GGTAGCCAGT GATGAATACT GGTTCCCGGT ATCGGGAGAG
GCGCTGAATC AAGGTCTTCC CCTGACTATC AGCCAGGGGG GCGCCGTCAT ACGTCTCGCC
CCAAGGGCCG ACATGAGTTC CGGTGCCTTG TTCCATGCCC CGGCCATTGA ACCTGCATCG
CTGGAGCTTT CTGCCCCCAA AGGTGCACAG GTGCCTAATC TGGTGCGCTC CATGGCCAAT
GCCGAAGCAC TGGCGTCGGC GGGCATGAAT GATGACTCGA GTGCGCTCTT GTTATCCAGC
GCCGCCCCTG CAGGGGAATA CCGTCTCAAG GTGCGAACTG CCGTTGACCC CCGTAGTCAG
TATCTGGTGA ATGTGAAGGA AAAACGCAGC CCGCTGGTGT TACATCTCAG AGCGCCCATG
GGCCTTAGCC TGGGGCAGTC CCTGGCAGGT TCACTGACGT TGGATGGACT GGGGCCGTTA
AGCAGTGCCA AGGCCAGGCT CAGGCAAGGA ACCCAGGAAT TGCCACTGCC ACTGACGCTG
GAAAATGGCG CATTCAGCGC TGCCATGCCC GAGGGCTTTG TACCTGAGTC TGCTGCTGAG
CTCAGCGAAT TGCTGATAGA TGTTCAGAGC AGTGTCGATG GGGTTGCAGT GAAGCGCACC
ATTAAGACGG CGTTCAAACA CTTTGCCCCC AGCGGCCGGG TGTTACCCGA CGCCCGTGTA
CAATGGCAAG GCGAGACGCC GGTGGCAGTC ACCTTTAATC TGGAACTGGC AGATGCCGGC
AGATATGCAC TTTCGGCAGT TCTCACGGGA ACGGACAGCA ATGGGAAAGA AGTCGCTATT
CACAGCAGTG CAGCGGCACG CTGGTTCGAG GGCAGCGACA GTCTGACTCT CCCGCTATCC
GCGGAGCTGA TTGAACGCTC CGGGTTGAAA GCCCCTTTCC AGATTCGGGA ACTTGAGCTT
AAGGATCAGG GACAGATGGC AACATTGTCG TTCCAGGACA AGGCGCTACA GTTGTAA
|
|---|
| Protein sequence | MMTHNKLAAA VLMSLMLSAC QGENSQDNAA AMGAQLVQLS PLSSGDMGFS QIQAPVTQGL
NTRRDDIQFV SPMSGEYQPR QWQRSQLVAS DEYWFPVSGE ALNQGLPLTI SQGGAVIRLA
PRADMSSGAL FHAPAIEPAS LELSAPKGAQ VPNLVRSMAN AEALASAGMN DDSSALLLSS
AAPAGEYRLK VRTAVDPRSQ YLVNVKEKRS PLVLHLRAPM GLSLGQSLAG SLTLDGLGPL
SSAKARLRQG TQELPLPLTL ENGAFSAAMP EGFVPESAAE LSELLIDVQS SVDGVAVKRT
IKTAFKHFAP SGRVLPDARV QWQGETPVAV TFNLELADAG RYALSAVLTG TDSNGKEVAI
HSSAAARWFE GSDSLTLPLS AELIERSGLK APFQIRELEL KDQGQMATLS FQDKALQL
|
|---|
| |