| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0615 |
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| Symbol | |
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| ID | 4602868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 767982 |
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| End bp | 768728 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779950 |
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| Product | putative spermidine synthase |
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| Protein accession | YP_926493 |
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| Protein GI | 119773753 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.439002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGAAT TTTCGGTTAT CTATCAAACT TCCGATGCTA TTGGCCCCAT CCGGGTGCTC
GACAATGGCG AGTCGCGCAT TCTTGCCTTT GGCGACAACG ATGAGCAAAG CAAGCTCAAC
AAAAAGACGC CCCACGTGCC CAAACACTCC TATGTGCAGG TGATGCTGGA GTCGCTGATG
TTTGCCAGCC CCAAGAGTGC CATCGTACTG GGCTTGGGGG GCGGCGCCCT GGTACATGCC
CTGCGACGCT TTGACGGTGC GCTTAAGTTG ACCGCTGTAG AGCTTAGGGG GGAGGTGATT
GATATTGCAA AGAAATATTT TTATCTCCCC ATAGGTAAAA AGCTCAACCT GATTGAGGCC
GACGCCGCCG TTTTTGTCAG CGACGCTGAC CACAAAAAAG TCGACATTAT TTTTGCTGAC
CTGTACGGCG CCGATGGTGT CGACGCCAAG CAGCTCACCG ACAGCTTTAT TCAAGGCTGT
GTCAGACTGC TCAAGCCCGG TGGTATGTTG GTGCTCAACT GCTGGAAAGA ACACCGTCAG
AGATTTGATG TCCGCGAGCA ACTGCAGCAA CACTTCTGCG ACGTGTATGG CAGCCTCAGC
AGCGGCGGCA ACTGGGTGGT ATTTGCCACC TTAACGCCGG GCGTGCTTAA GGAAGATGGC
TTGAAACAAG CCAGGGCCGA ATTGTCAGCC AAATTGGAGT TCAATGTTGG CAAGGCTTCG
CTGGGATTTG GCCCCTGGCT GGACTGA
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| Protein sequence | MSEFSVIYQT SDAIGPIRVL DNGESRILAF GDNDEQSKLN KKTPHVPKHS YVQVMLESLM
FASPKSAIVL GLGGGALVHA LRRFDGALKL TAVELRGEVI DIAKKYFYLP IGKKLNLIEA
DAAVFVSDAD HKKVDIIFAD LYGADGVDAK QLTDSFIQGC VRLLKPGGML VLNCWKEHRQ
RFDVREQLQQ HFCDVYGSLS SGGNWVVFAT LTPGVLKEDG LKQARAELSA KLEFNVGKAS
LGFGPWLD
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