Gene Sala_3156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3156 
Symbol 
ID4082492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3304445 
End bp3304897 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content67% 
IMG OID638011541 
Productthioesterase superfamily protein 
Protein accessionYP_618192 
Protein GI103488631 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC CGGAAAGCTG GCGGCTGAAC CCCGCCAGCT ACCCCGTCTG CGCCGAGTTC 
CAGACGCGCT TTCAGGACAT GGACATCAAC GGCCATCTCA ACAATGTGGC CTTTGCCGCG
CTGTTCGAAA GCGGCCGTGT GCTGATCAAC CGGCAGGTGC GCCCGCTGGG CGAGCGCCCT
GCGAACGAGC GCACGATGGT CGCGGCGGTC GAGATCAACT ATCTGGCCGA GGGCCATTTC
CCCGACCCGG TACAGATTGC GACCGGCATC GGGCGGATCG GGACGTCGAG CTGGACGATC
GTGCAGGCGA TGTTCCAGAA CGGCCGCTGC ATCGCCACCT GCGACACGGT CGTGGTGTGC
CGCACCGATG GCGCGGCGAA ACCGCTGCGC GCCGCGATGG TCGCGGAGCT GGAGGCGACG
ATGGCGAGGC CAGTTTCGCT GCCTCCCCCA TAG
 
Protein sequence
MPKPESWRLN PASYPVCAEF QTRFQDMDIN GHLNNVAFAA LFESGRVLIN RQVRPLGERP 
ANERTMVAAV EINYLAEGHF PDPVQIATGI GRIGTSSWTI VQAMFQNGRC IATCDTVVVC
RTDGAAKPLR AAMVAELEAT MARPVSLPPP