| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3135 |
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| Symbol | |
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| ID | 4082391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3286985 |
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| End bp | 3288142 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011520 |
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| Product | lycopene cyclase |
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| Protein accession | YP_618171 |
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| Protein GI | 103488610 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01789] lycopene cyclase
[TIGR01790] lycopene cyclase family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGGGC CGAACATCGA TAAATGCGAC ATCGCGATCG TCGGCGGCGG GCTTGCGGGC
GGACTTGCGG CGCTGGCGCT GGCGGCCAAG CGGCCCGATC TCGACATACG ACTGATCGAG
CCGGGGCCGG TCGGGGGCAA TCATATCTGG TCCTTTTTCG ACAGCGACAT CGCAAAGAAG
GACCGCTGGC TCGTCGCGCC GCTCGTCCGC CACCACTGGC CGCGCTATGA CGTGCGCTTT
CCCGCGCACG CGCGGACGCT GCACATGGGA TATAAAAGCA TCACCGGCGA AGCGCTGGCC
GAAGCGGTGG CGGCGGCGCT GCCGGACGGC CATATCATCG CCGATCGCGC GAAACATGTC
GCGCCCGACC ATCTGCTGCT GGCGCGCGGC GGGCGATTGT CGGCGAAGCA TGTCCTCGAC
GCGCGCGGCG CGGGCAAGTT TCCGACACTG GACTGCGGCT GGCAGAAGTT TGTCGGGCAG
GCGCTCACCG TGAAGGGCGG GCACGGCGTC GAACAGCCGG TGGTGATGGA CGCGACGGTG
GAGCAATTGG ACGGCTATCG CTTTGTCTAT CTCCTCCCCT TCGACGCCGA AACCCTGTTC
GTCGAGGACA CCTATTACAG CGACGACGCC GACCTCGACG AAATGGTGGT GCGCGAACGC
ATTGCCGCCT ATGCCGCGGC GCAGGGCTGG CAGGTGACGG CGACGATGCG CGAGGAGAGC
GGCGTGTTAC CAGTGGTGAT CGCGGGCGAT TTCGACCGGT TGTGGCCGGA ATCGGACCGC
ACGTCACGAA TCGGCGTGCG CGCAGGGATG TTCCACGCGA CGACGGGTTA TTCGCTGCCG
CACGCCGTAC GCACCGCGGC GGCGCTGCCC GCGCTGGTCG GTCGCGCCGA CCTGCCCGCG
CTGCTGCGCG CGCGCGCGCA GTCGGCGTGG CGGCGCCAGC GCTTTTACCG GATGCTGGAC
GCCATGCTGT TCCGCGCCGC CGATCCCGAT AGGCGTTACC GCATTTTCGA GCGATTCTAT
CGCCTGTCGC CGCGGCTCGT CGCGCGCTTC TATGCCGGGC GGTCGACCGC GGCGGACCGG
CTGCGCCTGC TTGCGGGAAA GCCGCCGGTG CCGGTCGGCC GCGCGCTGTC GGCGCTTGCA
AAACTGGATT GGAAATGA
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| Protein sequence | MVGPNIDKCD IAIVGGGLAG GLAALALAAK RPDLDIRLIE PGPVGGNHIW SFFDSDIAKK
DRWLVAPLVR HHWPRYDVRF PAHARTLHMG YKSITGEALA EAVAAALPDG HIIADRAKHV
APDHLLLARG GRLSAKHVLD ARGAGKFPTL DCGWQKFVGQ ALTVKGGHGV EQPVVMDATV
EQLDGYRFVY LLPFDAETLF VEDTYYSDDA DLDEMVVRER IAAYAAAQGW QVTATMREES
GVLPVVIAGD FDRLWPESDR TSRIGVRAGM FHATTGYSLP HAVRTAAALP ALVGRADLPA
LLRARAQSAW RRQRFYRMLD AMLFRAADPD RRYRIFERFY RLSPRLVARF YAGRSTAADR
LRLLAGKPPV PVGRALSALA KLDWK
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