| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2902 |
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| Symbol | |
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| ID | 4080926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3052440 |
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| End bp | 3053186 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638011287 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_617940 |
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| Protein GI | 103488379 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATTG AGCCCGCCGA GCAATTTGCC GGGGCACCCG GCCGCGCGCT GCGCCCGCAC
GGATACGGCG AAAGCGTCGA TGCGCTGGTG ACGGAATATG CCCCGCTGGT GCGCAAGATC
GCGTGGCAGG TCTTTTCGCG CGTGTCGCGA ACGAGCGAGC TCGACGACCT GATCCAGACC
GGGCTGATCG CGCTGATCGA GGCGAGCCGC CATTATGAAG AGCGCGGCTT TGCCTTTGCC
ACCTATGCCT CGACGCGCAT TCGCGGCGCG ATGATCGACC AGCTGCGCCG CGAGGCGGAC
GTCGGGCGGT CGGCGATGGT GGCGGCGAAA CGGCTTCAGG CGACGCGCGC CGCGCTCGAA
CAGCAATTGC TGCGCGCGCC GACCGCGGCC GAAATGGCGG TTGCGCTCGA CATGGCGGCG
GAAGATTATT TTGCGCTCGA GCGCAATGCG ACGCACGGCC GCTCGACCTC GCTCGACGAA
CTCACCGACA TCGGCGCCTT CCTCGCGGCC GACGAGGATG CGCTCGCCGA CGACCGCTGC
GAGCAGGAGG ATCTGATGGG CGCGCTGCGC CAGTGCGTCG GGCGGCTGTC CGAGCGCGAG
CAGCTGGTGC TCCAGCTCTA TTTCTTCGAG GAACTGAACC TCCACGAAAT CGGCCTGACG
CTCGACGTCA GTGCGGCGCG CATCTGCCAG ATCAAGCGCG AGGCGATGAT CAAGGTCGAA
CGCATGATGC GCGAGATGAC CGACTAG
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| Protein sequence | MRIEPAEQFA GAPGRALRPH GYGESVDALV TEYAPLVRKI AWQVFSRVSR TSELDDLIQT
GLIALIEASR HYEERGFAFA TYASTRIRGA MIDQLRREAD VGRSAMVAAK RLQATRAALE
QQLLRAPTAA EMAVALDMAA EDYFALERNA THGRSTSLDE LTDIGAFLAA DEDALADDRC
EQEDLMGALR QCVGRLSERE QLVLQLYFFE ELNLHEIGLT LDVSAARICQ IKREAMIKVE
RMMREMTD
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