| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2681 |
|---|
| Symbol | |
|---|
| ID | 4081832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2826533 |
|---|
| End bp | 2827177 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638011058 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_617719 |
|---|
| Protein GI | 103488158 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4944] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.76812 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCG ATAGCAATTT CCTGATTACC GAACTGGTCG GCGGACTCGA GCCGATACGA
CCGCTGCGCT TTTCAAGCGG GCTTGGCTTC GCCCTGGCCG GGCTGGGCGT CACATTGGGG
GCCGTCGCAT GGCTGTTCGG ATTTCGCACG GACGTGCTGG CGGGCAACTT CGATCCGGTC
TTCCTGCTTG CGGCCGGATT GTTCTTCCTG CTCGGTCTCG CGACCTCGGC GACCGTTGTC
GTCATGAGCC GGCCCCATAT CGGCAGCGAT CATAGCGGTT GGAGATGGGC CGCCGCCATG
ACGGCGCTGC TGCCGATTGC CGCTATCCTG ACGAGTCTCG AACGAGGCCG CATGGCTGTT
TCCGCCGCAG ATGCCGGACA TGGTTTCGAT TGCCTTGTCG CCGGCAGCGC ACTCGGCTTG
CTGATCGCCG CGGTGCTGGT GTGGTGGTTG CGGCGCGGCG CCCCCACGTC GCCCGAGCGC
GCCGGACTGC TCACCGGAAT CGCCGCAGGC AGCTTTGGCA TGTTCGCCTT CTCTTTGCAC
TGCCAGTATA ATGATATTAT CCATATCGGA CTGTGGCACG GCCTTGCCGT CGCGGCGACC
GCAGGCCTGG GCAGACTCGT TATTCCGCGC CTGATCCGCT GGTAG
|
|---|
| Protein sequence | MSRDSNFLIT ELVGGLEPIR PLRFSSGLGF ALAGLGVTLG AVAWLFGFRT DVLAGNFDPV
FLLAAGLFFL LGLATSATVV VMSRPHIGSD HSGWRWAAAM TALLPIAAIL TSLERGRMAV
SAADAGHGFD CLVAGSALGL LIAAVLVWWL RRGAPTSPER AGLLTGIAAG SFGMFAFSLH
CQYNDIIHIG LWHGLAVAAT AGLGRLVIPR LIRW
|
|---|
| |