| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2675 |
|---|
| Symbol | |
|---|
| ID | 4081883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2821340 |
|---|
| End bp | 2821858 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638011052 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_617713 |
|---|
| Protein GI | 103488152 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAT TACGCGAAGT CTTGAACGAT CTCGATGGCG GCAATTGCGC GCTGCCGCTG
GCGCTGGAGG CGATGGGCGA ACGCTGGTCG TTCATGATCC TGCGCGCGGC GTTCAACGGC
GTCCATCATT TCGAGGAGTT CCAGCAGGAG CTCAACATCG CGCGCAACAT ATTGTCGAAC
CGCCTGTCGA AGCTGGTCGA CCATGGCATC ATGGCGCGCG AGGTGATGGC CGAGGACCGG
CGCAAGGTGC GCTACCAGCT CACCGAGAAG GGCATCGACC TGCTGCCCGC GATGATCGCG
CTTCGCCAGT GGGGTGAAAA ATGGGGCGCT GGCGTGCCTT CCACCCCCGT GCTCGTCGAT
GCCCGCGACG AACAGCCGAT CGGCCCCGTC CGGCTGACCG CGCACGACGG CCGCGTGATC
GGTTATAAGG AGCTGCTGTG GAAGCATCGC TCGGAGCTTC AGCCGCTCGG CCAGGCGCGC
GTGCGCGCCG ACGGGCCGGC GCCGGTCGCG GCCGGATGA
|
|---|
| Protein sequence | MGKLREVLND LDGGNCALPL ALEAMGERWS FMILRAAFNG VHHFEEFQQE LNIARNILSN
RLSKLVDHGI MAREVMAEDR RKVRYQLTEK GIDLLPAMIA LRQWGEKWGA GVPSTPVLVD
ARDEQPIGPV RLTAHDGRVI GYKELLWKHR SELQPLGQAR VRADGPAPVA AG
|
|---|
| |