Gene Sala_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2428 
Symbol 
ID4081134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2564918 
End bp2565595 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID638010807 
Productmethyltransferase type 12 
Protein accessionYP_617469 
Protein GI103487908 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC CGAAACCCGT AGCAAGATCC TACACGCCAG CGGCAGGATA TCACTTCCTG 
ACGCCCTTTT ATGATTTCGG CGTCGCGGTG ACGACGCGCG AGCGCGTGTG GCGCGACCGT
CTCGTTCGCC ATATGGCGCT CGGCGAGGGT GACGTCATTC TCGATATCGG CTCGGGTACG
GGAAATCTCG CGCTGGCGAT CGCTCGCCAT AGCCGGGACG TCCGCTATCT TGGTTTCGAC
CCCGACGAGG CCGCGACGCG AATTGCCCGA ACGAAGACCG CGCAGATTGT TCCACCGCCG
GAGTTTCGAG TTGGCTTTTT CGCGGCTTCG GCGATCGATG ACTGGCCCTC GCCTTCCAAG
ATTGCGATCT GCCTCGTCCT TCATCAGGTC GGGCTTGAGG AAAAGGCACG TCTGCTACGC
GAGGCCCGGC AGGTGCTCGC GCCGGGCGGC AAACTCTATG TCACCGACTA TGGAGAACAG
CGCAGCCGCC TCATGCGGTT GCTGTTCCGC CTGACGATCC AGCAGCTCGA CGGCGTCCAG
GACACCCAAC CCAACGCCGA TGGATTGCTC CCGGTGCTGA TGAGAGAGGC AGGCTTTTGC
GATGTTCGCG AACTTGAGAC GTTCCGCACG CCAACCGGTG CGATCGCGAT CATCGAGGCC
CGAAAGCCCG GGACCTGA
 
Protein sequence
MPDPKPVARS YTPAAGYHFL TPFYDFGVAV TTRERVWRDR LVRHMALGEG DVILDIGSGT 
GNLALAIARH SRDVRYLGFD PDEAATRIAR TKTAQIVPPP EFRVGFFAAS AIDDWPSPSK
IAICLVLHQV GLEEKARLLR EARQVLAPGG KLYVTDYGEQ RSRLMRLLFR LTIQQLDGVQ
DTQPNADGLL PVLMREAGFC DVRELETFRT PTGAIAIIEA RKPGT