Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2428 |
Symbol | |
ID | 4081134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2564918 |
End bp | 2565595 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010807 |
Product | methyltransferase type 12 |
Protein accession | YP_617469 |
Protein GI | 103487908 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGACC CGAAACCCGT AGCAAGATCC TACACGCCAG CGGCAGGATA TCACTTCCTG ACGCCCTTTT ATGATTTCGG CGTCGCGGTG ACGACGCGCG AGCGCGTGTG GCGCGACCGT CTCGTTCGCC ATATGGCGCT CGGCGAGGGT GACGTCATTC TCGATATCGG CTCGGGTACG GGAAATCTCG CGCTGGCGAT CGCTCGCCAT AGCCGGGACG TCCGCTATCT TGGTTTCGAC CCCGACGAGG CCGCGACGCG AATTGCCCGA ACGAAGACCG CGCAGATTGT TCCACCGCCG GAGTTTCGAG TTGGCTTTTT CGCGGCTTCG GCGATCGATG ACTGGCCCTC GCCTTCCAAG ATTGCGATCT GCCTCGTCCT TCATCAGGTC GGGCTTGAGG AAAAGGCACG TCTGCTACGC GAGGCCCGGC AGGTGCTCGC GCCGGGCGGC AAACTCTATG TCACCGACTA TGGAGAACAG CGCAGCCGCC TCATGCGGTT GCTGTTCCGC CTGACGATCC AGCAGCTCGA CGGCGTCCAG GACACCCAAC CCAACGCCGA TGGATTGCTC CCGGTGCTGA TGAGAGAGGC AGGCTTTTGC GATGTTCGCG AACTTGAGAC GTTCCGCACG CCAACCGGTG CGATCGCGAT CATCGAGGCC CGAAAGCCCG GGACCTGA
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Protein sequence | MPDPKPVARS YTPAAGYHFL TPFYDFGVAV TTRERVWRDR LVRHMALGEG DVILDIGSGT GNLALAIARH SRDVRYLGFD PDEAATRIAR TKTAQIVPPP EFRVGFFAAS AIDDWPSPSK IAICLVLHQV GLEEKARLLR EARQVLAPGG KLYVTDYGEQ RSRLMRLLFR LTIQQLDGVQ DTQPNADGLL PVLMREAGFC DVRELETFRT PTGAIAIIEA RKPGT
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