Gene Sala_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2410 
Symbol 
ID4080848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2544061 
End bp2544765 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID638010789 
Producthypothetical protein 
Protein accessionYP_617451 
Protein GI103487890 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0940252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.107205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGATCC GTTGGCCGCT GCTCGTCCGG CGAACGCATA AATGGCTGGC CTTGGTGGTC 
GGCGTCCAGG CGCTGCTCTG GACGCTGACC GGCTTCTACA TGGTGGTCGT GCATATCGAC
ACCATCCATG GCGACCATCT CGTGCGCGCG CCGATGGTTC AGCCCTTCGA CCTCGCGGGC
CTCGCGCCGC CGTCGCGGAT CGTTGCGGCC GCGCCCGGTG CGTCCGAGGT TCGCTTGCAG
CGGTTCTTCG ATCGCCCCGT CTGGCGCGCT GAAACTCCCG AAGGGGCGCG GCTGTTCGAT
GCCCGCTCGG GTGCGCCGCT GCCTGCGCTT ACCGAGTCCC AGGTCCGCGA GCAGGCGCGG
CGCATCTACA CCGGCGACGG CAAGATCGTG TCGGTGCGGC TGTTGACCGA AGCGCCACAG
GAAATGCAGT CGCGCAAGCC GCCCTATTGG CAGGTCGAGT TCGAGGGCTG GAACCGCCCG
ACGCTCTATC TGTCGCCGAC GACCGGTGAG CTTATCTCGC GCCGCCACGC ATTGTGGCGC
GTGTTCGACT TCGCGTGGAT GCTCCACATC ATGGACTATG ATGAGCGGAC CGACGTCAAC
AACCCGTTGC TCCGCGTCGC GACCTGGAGC GTCTTCGCGA TGGCGATCAG CGGGGCGTGG
TTGCTGATCT GGTCCTTCAA ACGCCGCAAG AGGAAGCAGG CATGA
 
Protein sequence
MAIRWPLLVR RTHKWLALVV GVQALLWTLT GFYMVVVHID TIHGDHLVRA PMVQPFDLAG 
LAPPSRIVAA APGASEVRLQ RFFDRPVWRA ETPEGARLFD ARSGAPLPAL TESQVREQAR
RIYTGDGKIV SVRLLTEAPQ EMQSRKPPYW QVEFEGWNRP TLYLSPTTGE LISRRHALWR
VFDFAWMLHI MDYDERTDVN NPLLRVATWS VFAMAISGAW LLIWSFKRRK RKQA