Gene Sala_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2239 
Symbol 
ID4080253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2352615 
End bp2353043 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content67% 
IMG OID638010617 
Producthistidine triad (HIT) protein 
Protein accessionYP_617281 
Protein GI103487720 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCATCGCAAA GTTCGGCCAC CCGGCGACGC TGATCGCCGA CTATGCGCAT 
TGGGTCGTGC TGCTTCGCCC CGCGCAGCCG ACGCTCGGCG CGCTGGTGCT CGCGGCGAAA
TCGGACGCCA CGGCGTTCGG CGACCTGCCC GCCGCGGCTC ACGCCGAGCT CAAGACCGTC
ACCGCCGCCA TCGAGGCGGC GCTGAGGCAG GCCGTCGGCT ATGCCAAGAT CAATTATCTG
ATGCTGATGA TGGTCGACCC CCACGTCCAT TTCCACGTCC TGCCGCGCTA TGATGGCGAG
CGCAGCGGCG CCGGGATAAC GGTCGCCGAT GCCGGCTGGC CGGGGCAGCC CGATCTGGGG
CAGGCGGTAA AGCTCGACGA AAGCCAGATC GCCGCGCTCA CCGGCTGGCT CAAACCCTAT
TTCGCGTAG
 
Protein sequence
MNETIAKFGH PATLIADYAH WVVLLRPAQP TLGALVLAAK SDATAFGDLP AAAHAELKTV 
TAAIEAALRQ AVGYAKINYL MLMMVDPHVH FHVLPRYDGE RSGAGITVAD AGWPGQPDLG
QAVKLDESQI AALTGWLKPY FA