Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2239 |
Symbol | |
ID | 4080253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2352615 |
End bp | 2353043 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010617 |
Product | histidine triad (HIT) protein |
Protein accession | YP_617281 |
Protein GI | 103487720 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA CCATCGCAAA GTTCGGCCAC CCGGCGACGC TGATCGCCGA CTATGCGCAT TGGGTCGTGC TGCTTCGCCC CGCGCAGCCG ACGCTCGGCG CGCTGGTGCT CGCGGCGAAA TCGGACGCCA CGGCGTTCGG CGACCTGCCC GCCGCGGCTC ACGCCGAGCT CAAGACCGTC ACCGCCGCCA TCGAGGCGGC GCTGAGGCAG GCCGTCGGCT ATGCCAAGAT CAATTATCTG ATGCTGATGA TGGTCGACCC CCACGTCCAT TTCCACGTCC TGCCGCGCTA TGATGGCGAG CGCAGCGGCG CCGGGATAAC GGTCGCCGAT GCCGGCTGGC CGGGGCAGCC CGATCTGGGG CAGGCGGTAA AGCTCGACGA AAGCCAGATC GCCGCGCTCA CCGGCTGGCT CAAACCCTAT TTCGCGTAG
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Protein sequence | MNETIAKFGH PATLIADYAH WVVLLRPAQP TLGALVLAAK SDATAFGDLP AAAHAELKTV TAAIEAALRQ AVGYAKINYL MLMMVDPHVH FHVLPRYDGE RSGAGITVAD AGWPGQPDLG QAVKLDESQI AALTGWLKPY FA
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