Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2116 |
Symbol | |
ID | 4080091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2222777 |
End bp | 2224210 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010492 |
Product | succinate-semialdehyde dehydrogenase (NAD(P)+) |
Protein accession | YP_617158 |
Protein GI | 103487597 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0796029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CCTACGACGC CGACCTCCAG CTCTTCATCA ACGGCGCCTG GCGGAGCGGC GAGGGGCGCG ACGAGCGGCC GGTGTTCAAC CCGGCGACCG CGGGCACGAT CGCCGCGCTG CCGGTGGCGA CCAGCGCCGA CCTCGACGAA GCGCTCGCCG CTGCCGAACG CGGCTGGCCG GCCTGGCGCG CCAGGACCCC CGACGAGCGC GCCGCGCTGA TGCACAAGGC TGCGGGGCTG ATCCGTGAGC GCGTCGATCA CATCGCGACG TTACTGACGC TCGAACAGGG CAAGCCGATC GCCGAAGCGC GCGGCGAGGT GCTCTCGGCG GCGGGGCTGT TCGACTATTT CGCCGAGCAG GGCAAACGCA TCGAGGGCCG CGTGCTCCAG CGCCCGCTCG GCCAGCGCGC GATGGTCACC AAACATCCGG TCGGCCCGGT CGCGGGCTTC AGCCCGTGGA ACTTCCCGGT CAATCTGATG GTCAAGAAAA TCGCCCCCGC GCTCGCCGCG GGCTGCGTCG TGATCGCAAA AGCGCCCGAG GAAACGCCCG GCTGCACCAG CGCGGTGATG CGCTGCATCG CCGACGCAGG GATTTCCGGC GATGTGGCGC AGCTGGTCTA TGGCGATCCT GACATGATCA GCCGACATCT TCTTGCCAGT CCCGTGATCC GCAAGGTCAG CTTCACCGGC TCGACCGCCG TGGGCAAGCA TCTGATGCGG CTCGCCGCCG ACGGGGTGAA GCGCATCACG ATGGAACTGG GCGGCCATGC CCCGGTGCTG ATCTTCGACG ACTGCGACCT CGAAACCACG CTCGATCGCG TCGTTTGGCA GAAGTTCCGC AATGCTGGAC AGGTGTGCAT CTCGCCGACG CGCTTCTATG TCCAGCAGGG CATCTACGAC GCCTTCGTAA AGGGCTTTGC CGAGCGTACC GCCAAGGTGA AGATTGGCAG CGGCCTCGAC GCCGACACGC AGATGGGTCC GCTCGCCAAC GCGCGCCGCA TTCCCGCGCT GGAGGCGCTC GTCGCCGATG CAAAAGCAAA GGGCGCGCGC GTGATCGCGG GCGGCGAGGC GACGGGCGAG GGCTATTTTT TCCAGCCCAC CGCGATCGCC GATGTGCCGG TCGAGGCCGA CGCGATGAAC CACGAACCCT TTGGCCCGTT GGCGCTGATC CGCCCGTTCG GCACCGAGGA TGAGGCGCTC GAACAGGCCA ATCGCCTGCC CTACGGCCTC GCCGCCTTTG CCTTCACCGA GAATGGGCGG CGCATCAACC GGATCGTCGA CAGCATCGAA AGCGGGATGG TCGGGGTGAA CAGCTTCGTC ATCTCGGCGC TCGACACGCC CTTCGGCGGG ATCAAGGAAT CGGGTTTCGG AAGCGAAAGC GGGCCCGAGG GGCTGGACGG CTATCTGGTG ACGAAGGCGG TGCATATTTA TTGA
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Protein sequence | MTATYDADLQ LFINGAWRSG EGRDERPVFN PATAGTIAAL PVATSADLDE ALAAAERGWP AWRARTPDER AALMHKAAGL IRERVDHIAT LLTLEQGKPI AEARGEVLSA AGLFDYFAEQ GKRIEGRVLQ RPLGQRAMVT KHPVGPVAGF SPWNFPVNLM VKKIAPALAA GCVVIAKAPE ETPGCTSAVM RCIADAGISG DVAQLVYGDP DMISRHLLAS PVIRKVSFTG STAVGKHLMR LAADGVKRIT MELGGHAPVL IFDDCDLETT LDRVVWQKFR NAGQVCISPT RFYVQQGIYD AFVKGFAERT AKVKIGSGLD ADTQMGPLAN ARRIPALEAL VADAKAKGAR VIAGGEATGE GYFFQPTAIA DVPVEADAMN HEPFGPLALI RPFGTEDEAL EQANRLPYGL AAFAFTENGR RINRIVDSIE SGMVGVNSFV ISALDTPFGG IKESGFGSES GPEGLDGYLV TKAVHIY
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