Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2069 |
Symbol | |
ID | 4080005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2177677 |
End bp | 2178303 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638010443 |
Product | peptidase M22, glycoprotease |
Protein accession | YP_617111 |
Protein GI | 103487550 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.513401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.488956 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGACG CGCCAACGCT CGTCATCGAT TCCGCCAGCG AGGCCTGCTC GGTCGCGCTG GTGGCAGGCG GGCGCGTCGT CGACTTTCGC CATGAGGTGA TCGGGCGCGG CCACGCCGAG CGCCTCGTTC CGCTGATCGC CGAACTCGCG GACGGCGGGC GCGCCGATGC CATCGCGATC GGCTGCGGCC CCGGCAGTTT CGCCGGCGTG CGGATCGGCG TCGCCGCGGC GCGCGCGCTC GCGCTTGGCT GGCAGGTACC CGCGCATGGC TTTTCGACCC TCGCCCTCGT CGCGGCCGGT GCGGCCGATC CGATCGGCGA GGCGGGCGGC GCGCTCGTCG TGATGGAGGG CGGTCACGGC CAATGGTTCG TCCAGCCCTT TGCCGCCGAC CTGTCGCCGC GCGCCGATGC GTGTTCGCTG CTTCCCGACG CGGCGGTCGC GCTGAACGAT GTGCTCATCG TCGGCAATCG CGCCGAGGCC TTCGTTGCGC GCCGCGGGTC GGGGCGCGCG CTGGCCATGC TGCCCGACGC GCGCGCATTT CTGCGCCTGC CGCGCGGCGC GCTGACCAAC CCGCCGAGCC CCATTTATGG TCGCGCGCCC GACGCCCGAC CGATGAGCGG CGCATGA
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Protein sequence | MSDAPTLVID SASEACSVAL VAGGRVVDFR HEVIGRGHAE RLVPLIAELA DGGRADAIAI GCGPGSFAGV RIGVAAARAL ALGWQVPAHG FSTLALVAAG AADPIGEAGG ALVVMEGGHG QWFVQPFAAD LSPRADACSL LPDAAVALND VLIVGNRAEA FVARRGSGRA LAMLPDARAF LRLPRGALTN PPSPIYGRAP DARPMSGA
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