Gene Sala_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1957 
Symbolfrr 
ID4080506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2063871 
End bp2064425 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content63% 
IMG OID638010334 
Productribosome recycling factor 
Protein accessionYP_617002 
Protein GI103487441 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0233] Ribosome recycling factor 
TIGRFAM ID[TIGR00496] ribosome recycling factor 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAT ATGACAAGGC CGACCTTGAA CGCCGGATGC ACGGCGCCGT TGAATCGCTG 
AAGCACGACC TGGCCGGATT GCGCACCGGC CGTGCCAATG CGGCGCTGCT CGATCCGGTG
ACGGTGGAGG TTTACGGCAG CCAGATGCCG CTCAACCAGA TCGCGTCGAT CAGCGTGCCC
GAACCGCGGA TGCTGTCGGT GCAGGTGTGG GACAAGGCGA ACGTCGGCCC GGTCGACAAG
GCGATCCGTT CGGCGGGACT CGGCCTCAAT CCGATCGTCG ATGGCCAGAT GCTGCGTCTG
CCGATCCCCG AGATGACGCA GGAGCGCCGC AAGGAACTGT CGAAGCTTGC CGGCCAATAT
GCCGAAAAGG CGCGCGTTGC GGTGCGCAAC GTCCGCCGCG ACGGCATGGA CAATCTGAAG
CAGGACGAAA ACAAGAAGGA AATCAGCGAG GACGAACGCA AGCGCCACGA GACCGAGGTG
CAGAAGCTGA CCGATGCGAC GATCGCCGAG ATCGACGCCG CGGCGACGGC GAAGGAAAAG
GAAATCCTGG GCTAG
 
Protein sequence
MAKYDKADLE RRMHGAVESL KHDLAGLRTG RANAALLDPV TVEVYGSQMP LNQIASISVP 
EPRMLSVQVW DKANVGPVDK AIRSAGLGLN PIVDGQMLRL PIPEMTQERR KELSKLAGQY
AEKARVAVRN VRRDGMDNLK QDENKKEISE DERKRHETEV QKLTDATIAE IDAAATAKEK
EILG