Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1603 |
Symbol | |
ID | 4082755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1679910 |
End bp | 1681100 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009972 |
Product | phospholipase D/transphosphatidylase |
Protein accession | YP_616649 |
Protein GI | 103487088 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.420349 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.113302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATC CCTGCCCCAC TGCCGATCCG ATGCAAGGGC TGACGGCGGA CGTGGCGGAT CATCGGATCG AGTTGATCTT CGACGGCGGC GAGCGGATGA CGCGCCTGCT CCGACTGATC GATCGGGCGG CGCACAGCAT CGACCTCATC ATCTATATAT TTGAAGGCGA CGCCGCAGGA CTCAGCGTCC TGCGCGCGCT GACCGCCGCG GCGCGGCGCG GCGTGCGCGT GCGCGTGTTG ATCGACAGCT TCGGGTCGGG CGACACGCCC GACGCGCTGT TCGCGCCGCT GCGCGAAGCG GGCGGCGGCG CCACCTTTTT CTCGCGCCGC TGGCGTTCGT CCTATCTCAT CCGCAATCAC CAGAAGCTGA TCCTGATCGA CAATGCGGTT GCCATGACGG GGGGCTTCAA CATCGCCGAC GATTATCTGA GCGCGCCGCG CAGCGATGGC TGGCTCGACA TCGGCATGAT CGTCGAGGGG CCGAGCGTCG CGCGCGCGGC CGACTGGTTT GCCGAAATCC ATGATTATAC GGTCAGCAAC GACGGTAAGC TCCTGATATT GCGGCGGCTG ATCCGCGAAT GGCCGGTCGA TGGCGGCGCA GTGTCATGGC TTGTCGGCGG GCCGACGCAG CGGCTTTCGC CCTGGGCACG CGCCGTGCGC GCCGACCTGA ACGATGCGCG TCAACTCGAC ATGGCAATGG CCTATTTTTC ACCCGGCCAG GGCCTGCTCC GCCGCCTCGG CCGCGTCGCG CAGCGCGGTC GCGCGCGCTT CATCATGGCG GGCAAGTCCG ACAATGGCGC CACGATCGGG GCCTCGCGCC TTCTCTATGG CTATCTGCTT CGCAAGGGCG CCGACGTGTG GGAATATCGG CGGTGCAAGC TGCACATGAA GCTGATCGTC GTCGACGATG TGGTCTATAT CGGCTCGGCC AATTTCGACG TGCGCAGCCT GTTCGTCAAT GTCGAGCTGA TGGTGCGGAT CGCCGATGCC GGCTTTGCGG CGCAGATGCG GCGCTTTGTG GCGGGCCTCC AGCCCGATTG CGACATCATC ACCGCCGAGG CGCACAAGGC ACGCGCAAGC TGGTGGACGC GGCTGCGCTG GACACTCGCC TGGTTCGTCG TCGGCGTCGC CGATTATACG GTGTCGCGCA AACTCAACTT CGGCCTCGGT GACCCCGATC CCGATGTCTA G
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Protein sequence | MADPCPTADP MQGLTADVAD HRIELIFDGG ERMTRLLRLI DRAAHSIDLI IYIFEGDAAG LSVLRALTAA ARRGVRVRVL IDSFGSGDTP DALFAPLREA GGGATFFSRR WRSSYLIRNH QKLILIDNAV AMTGGFNIAD DYLSAPRSDG WLDIGMIVEG PSVARAADWF AEIHDYTVSN DGKLLILRRL IREWPVDGGA VSWLVGGPTQ RLSPWARAVR ADLNDARQLD MAMAYFSPGQ GLLRRLGRVA QRGRARFIMA GKSDNGATIG ASRLLYGYLL RKGADVWEYR RCKLHMKLIV VDDVVYIGSA NFDVRSLFVN VELMVRIADA GFAAQMRRFV AGLQPDCDII TAEAHKARAS WWTRLRWTLA WFVVGVADYT VSRKLNFGLG DPDPDV
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