Gene Sala_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1471 
SymbolilvH 
ID4081282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1530762 
End bp1531280 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content63% 
IMG OID638009836 
Productacetolactate synthase 3 regulatory subunit 
Protein accessionYP_616517 
Protein GI103486956 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.669339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA AGACCGAAGC CGGCGAGCGC CATGTGCTCG CCATCACCGT CGACAACGAA 
GCCGGCGTGC TCGCCAAGAT CACCGGGCTG TTCACCGCGC GCGGTTATAA TATCGAAAGC
CTCACCGTGG CCGACATCAG TTCGGATCAT GCGCTGTCGC GCATCACGAT CGTCACCAAC
GGCCCGCCGC CGATCATCGA CCAGATCATC GCGCAGCTCG ACCGGCTGGT CCCGGTCCAC
AAGGTTGTCG ACCTCACCGA TGCGGGCGAA ACGCATGTCG AGCGCGAAAT CGCGCTCGTC
AAAGTCGCGG GCACCGGCGA CAAAAGGATC GAGGCGCTGC GCATGGCCGA TGTCTTTCGC
GCCAAGGTTG TCGATACGAC GCTGACCAGC TTCATCTTTG AAATCACCGG GACGAGCGAC
AAGGTCGACC GCTTCATCGC GCTGATGCGC GAATGCGGGC TGGTCGAGGT CGGTCGCACC
GGCGTCGTTG CCATCGCACG CGGCCCGGAG GCGCTCTGA
 
Protein sequence
MKIKTEAGER HVLAITVDNE AGVLAKITGL FTARGYNIES LTVADISSDH ALSRITIVTN 
GPPPIIDQII AQLDRLVPVH KVVDLTDAGE THVEREIALV KVAGTGDKRI EALRMADVFR
AKVVDTTLTS FIFEITGTSD KVDRFIALMR ECGLVEVGRT GVVAIARGPE AL