| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1230 |
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| Symbol | |
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| ID | 4080454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1277797 |
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| End bp | 1279380 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009590 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_616278 |
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| Protein GI | 103486717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.448186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAAAAA GAAATAGGCG GGACGTCGTT CCGCACCCGA GCATAGAAAC AGGACCGATG
ATCAAACATG CGCTCAGCGT AACCCGTCAG GCCGACTTCG CGGCCTGGTA TCAGGACGTG
ATTGCCGAGG CCGATCTGGC CGAGGAGTCG GGGGTGCGCG GCTGCATGGT CATCAAGCCG
TGGGGCTATG GCATCTGGGA ACGCATCCAG ACGGTGATGG ACGCGGCGAT CAAGGATGCC
GGGGTCCAGA ACGCCTATTT CCCGCTGTTC ATTCCCTTGA GCTTCTTTGA GAAAGAAGCC
GACCATGTCG ATGGTTTTGC AAAGGAAATG GCGGTCGTCA CGCACCACCG GCTGATCGCG
GACAGCAAGG GGAAACTCGT TCCCGATCCC GAAGCGAAGC TCGAAGAACC GCTGATCGTC
CGCCCGACGT CGGAAACGGT GATCGGCGCC GCGATGAGCC GCTGGGTGCA AAGCTGGCGC
GACCTGCCGC TCAAGGTCAA CCAGTGGGCG AATGTCGTGC GCTGGGAAAT GCGCACGCGC
ATGTTCCTGC GCACGAGCGA GTTTCTGTGG CAGGAGGGCC ATACCGCGCA CGCCGACAGG
GACGATGCGA TGGCCGAGAC GCTGCGTGCG CTCGAAATGT ACCGCAGCTT TGCCGAGGAT
GTGCTGGCCA TGCCGGTGAT CGCGGGTGAA AAGCCCGAAA ATGAGCGGTT TCCGGGCGCG
GTCGCGACCT ATTCGATCGA GGCGATGATG CAGGACGGCA AGGCGCTTCA GGCCGGCACG
TCGCATTATC TGGGTACCGG TTTCGCCGAA GCCGCGGGCA TTCGCTATCA GGACAGGGAC
GGCGGGCACA GCCTGTGCCA TACGACGAGC TGGGGCACAT CGACGCGCAT GATCGGCGGC
GTGATCATGA CGCACGGCGA CGACGACGGG CTGCGCTGCC CCCCACGCAT CGCGCCGCAC
CAGATCGTCA TCGTCCCGAT GCTGCGCGAC AATGGCGAAG ACGCCGCGAT CCTCGATTAT
TGCCGCGACC TCGAAAGTCG GCTCAAGGCG CTCGACGCCT TCGGCGAGCC CGTGCGCGTG
CTGCTCGACA CCGGCGCGAA CAAGGCGCAG ACGAAACGCT GGGGCTGGGT CAAGAAGGGC
GCGCCGATCA TCGTCGAGGT CGGTCCGCGC GACGTCGCGG GCGGCAATGT CGCGGTGATC
CGGCGCGACC GGCTTTATCA GGAAAGCGGC AAGCTCAATT CGGCATTCGT CGCGAAAGGC
GATTTCATCG CCGACGCGGC GGCCACGCTG GAGGACATCC AGGCGAGCCT CTATGCCGAA
GCGCGCGAGC GGCTCGACGC CAATATCCGC CGCGACGTCA CCGACCTCGC CGCGCATTTC
TCGGGTGAGG ACAGGTTCGT CGGCTGGGCC GAGGTGCAAT GGGCACGCCC GACCGGCGGC
GCGCTCGACC GGATTGTCGA GCAGCTGAAG GCGCTCAAGC TGACGATGCG CAACACCCCG
CTCGACGCCG CGCCCGCGGA CAGCGCGTGC ATCTTCACCG GCGAACCCGC GGTCGAGCGC
GTGTTGATCG GGCGGACCTA TTAA
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| Protein sequence | MQKRNRRDVV PHPSIETGPM IKHALSVTRQ ADFAAWYQDV IAEADLAEES GVRGCMVIKP
WGYGIWERIQ TVMDAAIKDA GVQNAYFPLF IPLSFFEKEA DHVDGFAKEM AVVTHHRLIA
DSKGKLVPDP EAKLEEPLIV RPTSETVIGA AMSRWVQSWR DLPLKVNQWA NVVRWEMRTR
MFLRTSEFLW QEGHTAHADR DDAMAETLRA LEMYRSFAED VLAMPVIAGE KPENERFPGA
VATYSIEAMM QDGKALQAGT SHYLGTGFAE AAGIRYQDRD GGHSLCHTTS WGTSTRMIGG
VIMTHGDDDG LRCPPRIAPH QIVIVPMLRD NGEDAAILDY CRDLESRLKA LDAFGEPVRV
LLDTGANKAQ TKRWGWVKKG APIIVEVGPR DVAGGNVAVI RRDRLYQESG KLNSAFVAKG
DFIADAAATL EDIQASLYAE ARERLDANIR RDVTDLAAHF SGEDRFVGWA EVQWARPTGG
ALDRIVEQLK ALKLTMRNTP LDAAPADSAC IFTGEPAVER VLIGRTY
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