Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1020 |
Symbol | |
ID | 4081708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1053858 |
End bp | 1054640 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009380 |
Product | hypothetical protein |
Protein accession | YP_616070 |
Protein GI | 103486509 |
COG category | [R] General function prediction only |
COG ID | [COG4099] Predicted peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CAACCAAGGA ACCCTCTATG CGATACTGGA CTGCGGCCTT GCTGGGCCTC GCACTCGTGG CTTCTCCCGC CGTCGCCAGG ACGAAAGCTC GACCCGTTGT CGAGGGCCAG ACACCCCAGC CGCCGATCGC GTCGGACAAT TATCCGTACC AGTTGTTCGT ACCGCAGGGT TATCTGACCA ATGCGAGGAC GCAATATCCC TTGCTGATCT TCCTCCACGG GTCGGGCGAA CGCGGCGACG ATGTGGCGAA GGTCAAGGTT CATGGCCCAC CAAAGATCGC CGACCGCGAC CCCGCCTTTC CCTTCCTCAC CGTCTCGCCG CTGCTCGGCG CCGATCAGGA TTGGGACATT GCAAAGCTCG ACCGGCTCGT CGACCATATT GCGGCGACCT ATCGCGTCGA TCCCGCACGC ATCTACCTCA CCGGACTCAG CCGCGGCGGC CATGCGAGCT GGCGCTGGGC GATCGCCCAG CCGCGCCGCT TCGCCGCGGT CGCGCCCGTC GCGGGGCGCG GCAATCCCGG CGAGGCGTGT CGGTTGATGG ACCTTCCCGT CTGGGCTTTC CACGGCGACC GCGACGATGT GGTGATCCCC GAAGGCAGCT TCGCCATGGC GCGGGCGATC CGTGCCTGCG GCGGGCGCAA GGCGCGGCTG ACCATCTATC CCGACCTGGG CCACAATGCC TGGGATCCCG CCTATGACGA TCCGGCGCTC TATGCCTGGC TGCTCGAACA GGCGCTCCCC TCCCCGACGA GCACCGACAA GGACAAGAAA TGA
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Protein sequence | MTRSTKEPSM RYWTAALLGL ALVASPAVAR TKARPVVEGQ TPQPPIASDN YPYQLFVPQG YLTNARTQYP LLIFLHGSGE RGDDVAKVKV HGPPKIADRD PAFPFLTVSP LLGADQDWDI AKLDRLVDHI AATYRVDPAR IYLTGLSRGG HASWRWAIAQ PRRFAAVAPV AGRGNPGEAC RLMDLPVWAF HGDRDDVVIP EGSFAMARAI RACGGRKARL TIYPDLGHNA WDPAYDDPAL YAWLLEQALP SPTSTDKDKK
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