Gene Sala_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1020 
Symbol 
ID4081708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1053858 
End bp1054640 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content66% 
IMG OID638009380 
Producthypothetical protein 
Protein accessionYP_616070 
Protein GI103486509 
COG category[R] General function prediction only 
COG ID[COG4099] Predicted peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAT CAACCAAGGA ACCCTCTATG CGATACTGGA CTGCGGCCTT GCTGGGCCTC 
GCACTCGTGG CTTCTCCCGC CGTCGCCAGG ACGAAAGCTC GACCCGTTGT CGAGGGCCAG
ACACCCCAGC CGCCGATCGC GTCGGACAAT TATCCGTACC AGTTGTTCGT ACCGCAGGGT
TATCTGACCA ATGCGAGGAC GCAATATCCC TTGCTGATCT TCCTCCACGG GTCGGGCGAA
CGCGGCGACG ATGTGGCGAA GGTCAAGGTT CATGGCCCAC CAAAGATCGC CGACCGCGAC
CCCGCCTTTC CCTTCCTCAC CGTCTCGCCG CTGCTCGGCG CCGATCAGGA TTGGGACATT
GCAAAGCTCG ACCGGCTCGT CGACCATATT GCGGCGACCT ATCGCGTCGA TCCCGCACGC
ATCTACCTCA CCGGACTCAG CCGCGGCGGC CATGCGAGCT GGCGCTGGGC GATCGCCCAG
CCGCGCCGCT TCGCCGCGGT CGCGCCCGTC GCGGGGCGCG GCAATCCCGG CGAGGCGTGT
CGGTTGATGG ACCTTCCCGT CTGGGCTTTC CACGGCGACC GCGACGATGT GGTGATCCCC
GAAGGCAGCT TCGCCATGGC GCGGGCGATC CGTGCCTGCG GCGGGCGCAA GGCGCGGCTG
ACCATCTATC CCGACCTGGG CCACAATGCC TGGGATCCCG CCTATGACGA TCCGGCGCTC
TATGCCTGGC TGCTCGAACA GGCGCTCCCC TCCCCGACGA GCACCGACAA GGACAAGAAA
TGA
 
Protein sequence
MTRSTKEPSM RYWTAALLGL ALVASPAVAR TKARPVVEGQ TPQPPIASDN YPYQLFVPQG 
YLTNARTQYP LLIFLHGSGE RGDDVAKVKV HGPPKIADRD PAFPFLTVSP LLGADQDWDI
AKLDRLVDHI AATYRVDPAR IYLTGLSRGG HASWRWAIAQ PRRFAAVAPV AGRGNPGEAC
RLMDLPVWAF HGDRDDVVIP EGSFAMARAI RACGGRKARL TIYPDLGHNA WDPAYDDPAL
YAWLLEQALP SPTSTDKDKK