Gene Sala_0738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0738 
Symbol 
ID4081358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp742845 
End bp743924 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content58% 
IMG OID638009096 
Productaldose 1-epimerase 
Protein accessionYP_615791 
Protein GI103486230 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.547855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCACA GCACAGCAAC CGAGACCGAG TTCGGAACGC TCGACAATGG GGACATTGTG 
AAGCGCATCA AGCTCGCAAA TGAAAGCGGC ATGTCGGTAG GAATCATCAC CTACGGCGCG
TCCCTGCAAT CGGTCTGCGT TCCCGACCGA TATGGTGTAT TTGCCGATGT CGCAGCGGGT
TATGCCACGC TCGACGACTA TCTCCGCAAG CCGCAGTATT TCGGATCGAC CGTCGGGCGG
GTCGCCAATC GGCTCGCGAA GGCCCGTTTC ACATTGAACG GCAAAGATTA TGTGGTTTCG
GCCAATGATG GCTCCAATTC GCTCCATGGC GGAGCACGGG GATTCGACAA GGTCAACTGG
ACCGTGACCC ACAGGAGCGA TCGGTCGGTC ACCATGCAAT ATGTCAGTCC CGACGGCGAT
CAGGGCTATC CCGGCACCTT GACCGTCGGC GCAACCTATG CACTTGGCGC AGACAATGAA
TTGAGCGTCC ACTACCGCGC CACCACCGAC GCGACCACCC TGGTTAACCT GTCAAACCAT
GTTTACTGGA ATCTGGGCGG GGAAGGCGCG GCCTATAGCG CGATGGGCCA CCGTCTGACG
ATCCACGCGG ATCATTTTCT CCCCGTTGAT TCCGAGCTGA TCCCGACCGG TGAAATGCGT
CATGTCGAAG ACAGTCTGTT CGATTTTCGC ATGGGCAAGG TCATCGGCGA CGATGTTGGC
AGGATGGACG ATGAGCAACT CGGCTTCGGT CTGGGTTATG ATCATAATTG GGTCGTCGGC
GACGAAGTTG CCGCCGCGCC GCGGCCGGTG GCAAAGCTGA TTGATCCCCG TTCGGGGCGA
GCCATGACTT TGCTGTCCAA CCAACCCGGC CTGCAATTCT ACTCGGGCAA CTTCTTTGAC
GGCACGACGC GGGGCAAGGC GGGAAAGTCC TATTGCCGCG GCGATGCCAT CGCACTCGAG
CCGCAACAAT TTCCCGATGC GCCCAACCAG CCTGGCTTCG GCTCAATAGC ACTTCAACCC
GGCCAAACCT ATTCCAACAT GATTATCTGG CGATTTGAAT TGTCGGAGGA GCGATCATGA
 
Protein sequence
MHHSTATETE FGTLDNGDIV KRIKLANESG MSVGIITYGA SLQSVCVPDR YGVFADVAAG 
YATLDDYLRK PQYFGSTVGR VANRLAKARF TLNGKDYVVS ANDGSNSLHG GARGFDKVNW
TVTHRSDRSV TMQYVSPDGD QGYPGTLTVG ATYALGADNE LSVHYRATTD ATTLVNLSNH
VYWNLGGEGA AYSAMGHRLT IHADHFLPVD SELIPTGEMR HVEDSLFDFR MGKVIGDDVG
RMDDEQLGFG LGYDHNWVVG DEVAAAPRPV AKLIDPRSGR AMTLLSNQPG LQFYSGNFFD
GTTRGKAGKS YCRGDAIALE PQQFPDAPNQ PGFGSIALQP GQTYSNMIIW RFELSEERS