Gene Sala_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0547 
Symbol 
ID4081437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp561973 
End bp562659 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content71% 
IMG OID638008905 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_615601 
Protein GI103486040 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.355226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC TTCATCCCCT CGACCGCCCC ATCTGGTCGA TGCTCACCGG GCGGCAGGCG 
CATCTGGCGG AGGGCGACGC GCGGGCGCTC AGGATCGATC GCGGTTATGG CGTGTTCGGG
GTGGCCGCCG ACACCGGCGC TGCGGCGCAG GCGGCGCTGG CCGCGCTGGT GCCCGATGAC
GGCGAGCTCT GGATCGTCGA GGGCGATCCC TGGCCCGTAC CGCCGGGCGT GCGCGAGGTG
AGGCGCGCGG TGCTGGCGCA GATGGTTGCC GACGGACCGC CGCCCGCGCC GCGCGACGGC
GAACCGCCGA TCGTCGCTTT GCACGATTCG GATGCACCCG AAATGGCGGC GCTTGCCGAC
CATGCGAAAC CCGGGCCGTG GGGACCGGCG ACGCACCGCT ACGGTCCCTT TTTCGGCGTT
CGCGAGGATG GCCGCCTGCT CGCGATGGCG GGGCAAAGGA TGTTGATGCC CGGGATGGCC
GAGGTCAGTG GCGTCGCGAC CTGGGCCGAT TGTCGCGGCC GCGGGCTGGC GCGCGCGCTG
ATCGGCCATG TCATGCGCGC GATGGTGGCG CGCGGCGAAA CGCCGTTCCT GCACAGCTAT
GCCGACAATG CGGGCGCGAT TGCGCTGTAT GAATCCCTGG GCTTTCGGAT TCGACGCGAA
GTGCATGTGC TGGTGATCGC GCGGTGA
 
Protein sequence
MTVLHPLDRP IWSMLTGRQA HLAEGDARAL RIDRGYGVFG VAADTGAAAQ AALAALVPDD 
GELWIVEGDP WPVPPGVREV RRAVLAQMVA DGPPPAPRDG EPPIVALHDS DAPEMAALAD
HAKPGPWGPA THRYGPFFGV REDGRLLAMA GQRMLMPGMA EVSGVATWAD CRGRGLARAL
IGHVMRAMVA RGETPFLHSY ADNAGAIALY ESLGFRIRRE VHVLVIAR