Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0335 |
Symbol | ruvA |
ID | 4081033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 339509 |
End bp | 340108 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008694 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_615391 |
Protein GI | 103485830 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.642504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGCGA AACTCACCGG ACGGCTCGAC AGCAACGGCG CAGGCCATGC GGTGATCGAT GTCGGCGGCG TCGGCTATCT GGTCGAGGCG TCGGCGCGCA CCCTCGACGC GCTGGGCGCG GTCGGCGGCG AGGTCACCAT CCACACCGAA ATGCTGGTGG GTGAGGATTT TCTGCGCCTG CTCGGCTTCG CACGCGCCGA GGAACGCGAC TGGTTCCGCC TGCTCACCAG CGTCCAGGGC GTCGGCGCCA AGGTCGCGCT GGCGATCCTC TCGGCGCTCG AAGTCGCCGA CCTGCAACGC GCGCTGGCGA GCGGCGACAG CGCGATGATC GCGCGCGCCA ACGGCGTCGG CCCGAAACTC GCGCAGCGCA TCACGCATGA ACTGAAGGAC AAGGCCGGCG CGCTCGGCGG CATTTCGGGG AGCGGCCCGG CCCTCTCGGC CGCCGCCGGC CCGGTCGGCG ACGCCATTGC CGCACTCACC GGCCTCGGCT TCAAACCCGG CGAAGCCAGC GCCGCGGTCG CGGCGGCTAA TGAGGAATTG GGCGCGGATG CCAGCCTTGA TGCACTTGTC CGCGTGGCGC TCAAGAAAGC GGCGAAGTGA
|
Protein sequence | MIAKLTGRLD SNGAGHAVID VGGVGYLVEA SARTLDALGA VGGEVTIHTE MLVGEDFLRL LGFARAEERD WFRLLTSVQG VGAKVALAIL SALEVADLQR ALASGDSAMI ARANGVGPKL AQRITHELKD KAGALGGISG SGPALSAAAG PVGDAIAALT GLGFKPGEAS AAVAAANEEL GADASLDALV RVALKKAAK
|
| |