| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1508 |
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| Symbol | |
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| ID | 6332506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1552157 |
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| End bp | 1552690 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657786 |
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| Product | peptide deformylase |
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| Protein accession | YP_001931664 |
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| Protein GI | 188997413 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 71 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTATA AAATCAGAAC ATGGCCAGAT CCAATTTTAA AAGAGCCAAC AAAAGAAGTA
GATTTTTTTG ATGAAAGATT ACAAGAGTAT ATAAATAAAA TGTGGGAATT TATGTATAAA
GAAGAAGGCG TTGGACTTGC TGCAAATCAA ATTGGCATTC CATATCAAAT TTTAGTTATC
GATACATCTT TAAGAGAAAA AAGAAGCGAA GAAGAAGCAG AACCACCGGT AAAGATGGTT
TTGATAAATC CAAAAATTGT CGAAAAAGAA GGAGAAGTCC AATCAACAGA AGGGTGTTTA
AGCTTTCCAG GTGTTCAAAT TACAATCCCA AGAGCGAAAA GGGTTAAAGT AGTTGGCAAA
AATGAAAAAG GTGAAGATGT AGAAATAGAA AGCTCGGAGT TTTTAGCCAT CGTACTTCAG
CATGAGATAG ACCATCTAAA CGGTATCCCA TTTATAAATT ATCTTTCACC ATTAAAAAGA
AAGCTTGTGT TAGATAAATA CTTAAAATCT TTGAAAGAGC TTGAAAAAGC TTAA
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| Protein sequence | MDYKIRTWPD PILKEPTKEV DFFDERLQEY INKMWEFMYK EEGVGLAANQ IGIPYQILVI
DTSLREKRSE EEAEPPVKMV LINPKIVEKE GEVQSTEGCL SFPGVQITIP RAKRVKVVGK
NEKGEDVEIE SSEFLAIVLQ HEIDHLNGIP FINYLSPLKR KLVLDKYLKS LKELEKA
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