Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1258 |
Symbol | |
ID | 6331445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1303666 |
End bp | 1304400 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642657543 |
Product | Superoxide dismutase |
Protein accession | YP_001931423 |
Protein GI | 188997172 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.651957 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAGAA GAGATTTTAT TAAATTGTCG GGAATCAGTA TTTTAGCTTC AAGCACAAAT ATTTTAGCAA TGGAAATTTT AGAAAAAGAA GAAAAACCTA AATCAGGAGG TAAGAAAATG AAAGTTATGA AACTTCAGCC AAAGGACCAT TTAAAACCAA AAGGTCTTGT AGGAATATCA GATGAGCAAA TTGAGGTTCA TTTTGAAGCT CATTACAAAG GTTATGTAGC AAAATACAAT GAAATTCAAG AGAAGTTAGC ATCTAATTTT GCGGACAGGT CTAAGGCTAA TCAAAACTAC TCTGAATACA GAGCTCTTAA AGTTGAGGAA AGCTTTAACT ATATGGGGGT TATTTTACAT GAACTTTATT TTGAAAACTT AATCGGTGGT GGAAAAGGTG AGCCAAGCGA ACAGCTTAGA AAAGCTATAG AAGAATGGTT TGGTTCGGTT GATAACTGCT TAAATGAAAT TAAAGCTACA GGTATAGCAT GCAGAGGTTG GGCTACTTTA TCTTATGATT TGTACAACAA AATGTTATTT GTAAACGGTT TTGATGCTCA CAATCAATAT GGGTTTGTTG GCTCTATTCC ATTGATAGTT CTGGATGTAT ACGAACATGC TTATTATGTA GACCAAAAAA ATAAAAGACC ACCATATATT GATGCATTTT TCAAAAATCT TAACTGGGAT GTGATCAATC AGAGATTTGA AAATGCTTTA AAAGTAAAAG TTTAA
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Protein sequence | MDRRDFIKLS GISILASSTN ILAMEILEKE EKPKSGGKKM KVMKLQPKDH LKPKGLVGIS DEQIEVHFEA HYKGYVAKYN EIQEKLASNF ADRSKANQNY SEYRALKVEE SFNYMGVILH ELYFENLIGG GKGEPSEQLR KAIEEWFGSV DNCLNEIKAT GIACRGWATL SYDLYNKMLF VNGFDAHNQY GFVGSIPLIV LDVYEHAYYV DQKNKRPPYI DAFFKNLNWD VINQRFENAL KVKV
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