Gene SYO3AOP1_1092 details

Gene Information

• Locus tag: SYO3AOP1_1092
• Symbol: smpB
• ID: 6332028
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 1134698
• End bp: 1135156
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642657378
• Product: SsrA-binding protein
• Protein accession: YP_001931263
• Protein GI: 188997012
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 54
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGAAA AAGTAGTTGC AACAAATAAA AAAGCCTTTC ATGACTATGC CATACTTGAA 
AAGTATGAAG CGGGTATAGT GCTAACAGGT TCAGAAGTGA AATCTTTAAG AGAAGGAGCA 
TGTAATTTAA AAGACAGCTT TGTTATGATT GAAGACGGGG AAGCATGGCT GTATAATTGC 
TATATTGCAC CATACAAACC CGCGGCAAAA TTTGGTCATG ACCCAACAAG AAAAAGAAAA 
TTACTTCTTC ATAAAAAAGA GATTTTAAAG CTTATGGGAA AAGTCAAGGA AAAAGGGTTA 
ACAATCGTTC CACTTAGAGT TTACTTTAAA AATGGAAAAG CGAAAGTTGA AATAGCGCTT 
GCAAAAGGTA AAGTTAAGTA TGAAAAAAGA GAAGCGATGA AAGAAAAAGA CATGAAGAGA 
GAAATAGAAA AGTCTTTCAA AGGAAAAATA AAACTATAA 

 

Protein sequence

MSEKVVATNK KAFHDYAILE KYEAGIVLTG SEVKSLREGA CNLKDSFVMI EDGEAWLYNC 
YIAPYKPAAK FGHDPTRKRK LLLHKKEILK LMGKVKEKGL TIVPLRVYFK NGKAKVEIAL 
AKGKVKYEKR EAMKEKDMKR EIEKSFKGKI KL