Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0478 |
Symbol | |
ID | 6331937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 490846 |
End bp | 491718 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642656767 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001930673 |
Protein GI | 188996422 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0101609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTAC TTGATTATCA CAAATTAAGA ATATTTAAAG CAGTTGCAGA CTTAAAAAGC TTTTCAAAAG CTGCACAGAT GCTTTTTTTA TCCCAGCCAA CTGTGACGCT TCAAATCAAA AAGATAGAAA ATTACCTTGG AATGACTTTG TTTAGAAGAC ATAAATCAAA TCTTGAACTT ACAGAAGAAG GAAAAGTCCT TTATCAGTTT GCAAGCAAAA TAATAGAAGA TTACATGAAT ATGGAAGAAA ATCTTAAAAA TGTAAGAAAA ACTTCCATTC TTTACATAGG TTGTAGTTCT ACAATAGGTG ATTATCTTCT TCCTAAGATA ATTACAAAAT TTATATCAGA AAATCCAGAA GTAAGCATAA AAATTTTCAT AGGCAACTCA AAGGAAGTTG AAGATGGTGT ACTATCAAAG ATTTTTAATA TAGGGCTTGT AGAAGATAAC ATAATATCAA ACAAGCTTGA TATATCTGAA TTTTATGAAG ATGAGATAAT CTTGATTGCA TCTAAAAATA ATTCTATTTC TGAGTATCTA AAAACACAAA ATGAGCTAAA AAATTATAAA TTTATATTCA GAGAGTTTGG GTCAGGAACA AGGAATATAG TAGAACAAAG TTTAAAGATA AAAATTAGTC CATCTATGGA AGTTTCAAGT AGTAAAGCTA TTGCTAAGAT AGTGCAAAAC TCAGATTACT TAGCCTTTGT ATCTAAACTT GTTGCTGAAG ATTTAATCAA TGACGGACAT CTGAAAAAAA TCGAAGTTGA TGACCTAAAA ATTACAAGAA AGTTTTCCAT TATCACACAA AAAAATATAA GATTATCTTC TGTTGAAAAT AAATTTTACA GATTCTTGAA AAATTTTACT TAG
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Protein sequence | MEVLDYHKLR IFKAVADLKS FSKAAQMLFL SQPTVTLQIK KIENYLGMTL FRRHKSNLEL TEEGKVLYQF ASKIIEDYMN MEENLKNVRK TSILYIGCSS TIGDYLLPKI ITKFISENPE VSIKIFIGNS KEVEDGVLSK IFNIGLVEDN IISNKLDISE FYEDEIILIA SKNNSISEYL KTQNELKNYK FIFREFGSGT RNIVEQSLKI KISPSMEVSS SKAIAKIVQN SDYLAFVSKL VAEDLINDGH LKKIEVDDLK ITRKFSIITQ KNIRLSSVEN KFYRFLKNFT
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