| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_A0114 |
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| Symbol | ompA |
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| ID | 1172537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004349 |
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| Strand | + |
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| Start bp | 99408 |
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| End bp | 100436 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637346561 |
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| Product | outer membrane protein A |
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| Protein accession | NP_720438 |
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| Protein GI | 24376330 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.394411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA AACTAATTTT ATTGACTTTT TTACCATTTT CATTTTCTAC TCTGGCGTCA
GAGCCCCCTT CTTATTTGCC ATTTCAATCT TACTGGTATG CAGGTGCAGG CTTAGGTCAA
GGCCATTACA GTAATGGCAG TAACCCACAG TCTTACGATA GCGTGCGTGA CCGTTTTGCA
GGTTCGGTGT ATTTGGGTTA TCAAGTTAAC CCTTACCTTG CGCCGGAATT GAGTTATCAA
TTCCTAGGCA GTGCTTATGC CAATTATGAG CAAGGGCAGA TTAGTGGTGA TTTTCAACAG
GTGGTCTTGG CGGCTCGCTT TGGTTATCCG CTAACGACAT CCCTTTATCC TTATGTGAAG
GTGGGTGGTG CCGGTTGGTT TGGTGACAGC GAAGGATTGC GCTCTGGCAG TGAGCGAGGA
TTCTCTCCTA TTGTCGCTGC GGGTGTTGAA TATGCATTTA CCCCAAGACT GAGTGGGCGA
CTGGAACACC AGTACACCGA CAGCTTAGGT GCTGATAGCA TTGGTTACAC GGACCATCAC
CTCACAACGT TGGGGTTGAG TTGGCGCTTT GGGCATTCCG CTCCGGTTAC GGCTCCAACG
CCTGAGGTGG TCACTCAAGT TGTTGAATTA CCACCAGTGG TTCAAATCGT AGAAAAGCGC
CAGTTTGTGT ATTCAGAGCA GAAAGGCAAC AGCTTGTTGT TTGCGCATAA CTCCAGTGTA
TTGAATAACA CATCGCAATT TGCTGATGTC GTTAGTTTTT TGAAACAACA TCCAACAGCC
TCTGCTGTGA TTACAGGACA TACCGATAGC ACGGGCTCAG ATAAATATAA CCAATGGTTA
TCAGAGCGCC GCGCGATTTC TGTTGCAAAT TACTTGGTTT CCCAAGGCGT GCAATCGGCG
CAATTAACCT CTGTTGGTAA AGGCGAAACA GCATCGGTTG CGGATAACAC GACTGAAAAT
GGCCGTGCGA TGAACCGTCG TGTTGAAATT ACCATCCCTG AATTTACCGT GACCAAAACG
GTAAAGTAA
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| Protein sequence | MKYKLILLTF LPFSFSTLAS EPPSYLPFQS YWYAGAGLGQ GHYSNGSNPQ SYDSVRDRFA
GSVYLGYQVN PYLAPELSYQ FLGSAYANYE QGQISGDFQQ VVLAARFGYP LTTSLYPYVK
VGGAGWFGDS EGLRSGSERG FSPIVAAGVE YAFTPRLSGR LEHQYTDSLG ADSIGYTDHH
LTTLGLSWRF GHSAPVTAPT PEVVTQVVEL PPVVQIVEKR QFVYSEQKGN SLLFAHNSSV
LNNTSQFADV VSFLKQHPTA SAVITGHTDS TGSDKYNQWL SERRAISVAN YLVSQGVQSA
QLTSVGKGET ASVADNTTEN GRAMNRRVEI TIPEFTVTKT VK
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